Pabpn1l Gene Summary [Rat]

Predicted to enable poly(A) binding activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay. Predicted to act upstream of or within maternal-to-zygotic transition of gene expression; negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process; and negative regulation of protein ubiquitination. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human PABPN1L (PABPN1 like, cytoplasmic). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Pabpn1l
Official Name
poly(A)binding protein nuclear 1-like [Source:RGD Symbol;Acc:1562761]
Ensembl ID
ENSRNOG00000029558
Bio databases IDs NCBI: 307920 Ensembl: ENSRNOG00000029558
Aliases poly(A)binding protein nuclear 1-like
Synonyms ePABP2, Gm1108, PABPN1 like, PABPN1 like, cytoplasmic, PABPNL1, poly(A)binding protein nuclear 1-like, RGD1562761
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Pabpn1l often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA recognition motif (RRM) superfamily
  • RNA recognition motif
  • poly(A) binding protein
  • protein binding
  • RNA binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
regulates
role in cell
  • polyubiquitination in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • cytosol

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Pabpn1l gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoplasm

Molecular Function

What the gene product does at the molecular level
  • poly(A) RNA binding

Gene-Specific Assays for Results You Can Trust

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