SPTSSB Gene Summary [Human]

Serine palmitoyltransferase (SPT; EC 2.3.1.50) catalyzes the first committed and rate-limiting step in sphingolipid biosynthesis. SSSPTB is a small SPT subunit that stimulates SPT activity and confers acyl-CoA preference to the SPT catalytic heterodimer of SPTLC1 (MIM 605712) and either SPTLC2 (MIM 605713) or SPTLC3 (MIM 611120) (Han et al., 2009 [PubMed 19416851]).[supplied by OMIM, Nov 2010]

Details

Type
Protein Coding
Official Symbol
SPTSSB
Official Name
serine palmitoyltransferase small subunit B [Source:HGNC Symbol;Acc:HGNC:24045]
Ensembl ID
ENSG00000196542
Bio databases IDs NCBI: 165679 Ensembl: ENSG00000196542
Aliases serine palmitoyltransferase small subunit B, androgen down regulated in mouse prostate, small subunit of serine palmitoyltransferase B
Synonyms 1110032A04Rik, ADMP, C3orf57, LOC100909705, serine palmitoyltransferase small subunit B, serine palmitoyltransferase, small subunit B, SSSPTB
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SPTSSB often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Small subunit of serine palmitoyltransferase-like
  • serine C-palmitoyltransferase
  • enzyme
  • protein binding

Pathways

Biological processes and signaling networks where the SPTSSB gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • Parkinson disease
regulated by
  • SMARCAL1
  • 4,5,6,7-tetrabromo-2-azabenzamidazole
  • AHSG
  • mir-30 (includes others)
regulates
  • ceramide
  • L-serine
  • myristoyl-coenzyme A
  • C16 3-ketodihydrosphingosine
  • SPTLC2
  • SPTLC1
  • SPTLC3
  • C20 sphingosine-1-phosphate
  • sphingolipid
  • C20 sphingosine
role in cell
  • quantity
  • degeneration
  • localization
  • organization
  • accumulation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • endoplasmic reticulum membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SPTSSB gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • sphingosine biosynthetic process
  • ceramide biosynthetic process
  • endoplasmic reticulum organization
  • sphingolipid biosynthetic process

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum membrane
  • serine C-palmitoyltransferase complex

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • serine C-palmitoyltransferase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.