PCDHAC2 Gene Summary [Human]

This gene is a member of the protocadherin alpha gene cluster, one of three related gene clusters tandemly linked on chromosome five that demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters. The alpha gene cluster is composed of 15 cadherin superfamily genes related to the mouse CNR genes and consists of 13 highly similar and 2 more distantly related coding sequences. The tandem array of 15 N-terminal exons, or variable exons, are followed by downstream C-terminal exons, or constant exons, which are shared by all genes in the cluster. The large, uninterrupted N-terminal exons each encode six cadherin ectodomains while the C-terminal exons encode the cytoplasmic domain. These neural cadherin-like cell adhesion proteins are integral plasma membrane proteins that most likely play a critical role in the establishment and function of specific cell-cell connections in the brain. Alternative splicing has been observed and additional variants have been suggested but their full-length nature has yet to be determined. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
PCDHAC2
Official Name
protocadherin alpha subfamily C, 2 [Source:HGNC Symbol;Acc:HGNC:8677]
Ensembl ID
ENSG00000243232
Bio databases IDs NCBI: 56134 Ensembl: ENSG00000243232
Aliases protocadherin alpha subfamily C, 2
Synonyms CNRc2, PCDH-ALPHA-C2, PCDH-α-C2, protocadherin alpha subfamily C, 2, protocadherin α subfamily C, 2
Species
Human, Homo sapiens
OrthologiesMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human PCDHAC2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Cadherin-like
  • Cadherin repeat-like domain
  • Cadherin cytoplasmic C-terminal
  • Cadherin C-terminal cytoplasmic tail, catenin-binding region

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
regulated by
  • SNCA
  • MDM4
  • pidnarulex
  • 3,5-dihydroxyphenylglycine

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • cellular membrane
  • Plasma Membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human PCDHAC2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • nervous system development
  • cell adhesion
  • homophilic cell adhesion

Cellular Component

Where in the cell the gene product is active
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • calcium ion binding

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