TSIX Gene Summary [Human]

In mammals, dosage compensation of genes on the X chromosome occurs by X inactivation, which is regulated in cis by the X-inactivation center (XIC) and expression of the XIST non-coding RNA. This gene expresses a non-coding antisense transcript across the 3' end of the XIST locus, and is coexpressed with XIST only from the inactive X chromosome. The mouse ortholog of this locus is required for imprinted X inactivation in extraembryonic tissues and silences Xist through modification of the chromatin structure in the Xist promoter region. In contrast, imprinted X inactivation does not occur in human extraembryonic tissues and transcripts from this locus do not repress XIST expression or affect random X chromosome inactivation in embryonic cells. This transcript is thought to be unspliced and extend over more than 30 kb, but its exact nature has not been determined. [provided by RefSeq, Jul 2008]

Details

Type
Long Non-Coding RNA
Official Symbol
TSIX
Official Name
TSIX transcript, XIST antisense RNA [Source:HGNC Symbol;Acc:HGNC:12377]
Ensembl ID
ENSG00000270641
Bio databases IDs NCBI: 9383 Ensembl: ENSG00000270641
Aliases TSIX transcript, XIST antisense RNA, XIST antisense RNA (non-protein coding), long intergenic non-protein coding RNA 13
Synonyms LINC00013, NCRNA00013, TSIX transcript, XIST antisense RNA, X (inactive)-specific transcript, opposite strand, X (inactive)-specific transcript, opposite strand (Tsix), antisense, XIST-AS, XIST-AS1
Species
Human, Homo sapiens
OrthologiesMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human TSIX often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • binding protein
  • protein binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • PRC2
disease
  • gastric cancer
  • acute spinal cord injury
  • gastric adenocarcinoma
  • gastric epithelial cancer
  • diffuse cutaneous systemic sclerosis
  • chronic spinal cord injury
regulated by
regulates
role in cell
  • expression in
  • activation
  • inactivation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.