Pabpc5 Gene Summary [Rat]
Predicted to enable mRNA 3'-UTR binding activity; poly(A) binding activity; and poly(U) RNA binding activity. Predicted to be located in mitochondrial matrix. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytoplasmic stress granule; cytosol; and nucleus. Orthologous to human PABPC5 (poly(A) binding protein cytoplasmic 5). [provided by Alliance of Genome Resources, Jul 2025]
Details
| Type | Protein Coding |
| Official Symbol | Pabpc5 |
| Official Name | poly A binding protein, cytoplasmic 5 [Source:RGD Symbol;Acc:1587661] |
| Ensembl ID | ENSRNOG00000003354 |
| Bio databases IDs | |
| Aliases | poly A binding protein, cytoplasmic 5 |
| Synonyms | C820015E17, LOC100360473, LOC302768, PABP5, poly A binding protein, cytoplasmic 5, poly(A) binding protein cytoplasmic 5, poly(A) binding protein, cytoplasmic 5 |
| Species | Rat, Rattus norvegicus |
| Orthologies |
Protein Domains
A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Pabpc5 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
- ELAV/HuD family splicing factor
- RNA recognition motif (RRM) superfamily
- RNA recognition motif
- protein binding
- Occluded RNA-recognition motif
Subcellular Expression
Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
- Cytoplasm
- cytosol
- mitochondrial matrix
Gene Ontology Annotations
Describes the biological processes, cellular components, and molecular functions associated with the rat Pabpc5 gene, providing context for its role in the cell.
Cellular Component
Where in the cell the gene product is active
- nucleus
- cytoplasmic stress granule
- mitochondrial matrix
- cytosol
Molecular Function
What the gene product does at the molecular level
- protein binding
- poly(A) RNA binding
- poly(U) RNA binding
- mRNA 3'-UTR binding