Cry2 Gene Summary [Rat]

This gene encodes a flavin adenine dinucleotide-binding protein that is a key component of the circadian core oscillator complex, which regulates the circadian clock. This gene is upregulated by Clock/Arntl heterodimers but then represses this upregulation in a feedback loop using Per/Cry heterodimers to interact with Clock/Arntl. Polymorphisms in this gene have been associated with altered sleep patterns. The encoded protein is widely conserved across plants and animals. [provided by RefSeq, Feb 2014]

Details

Type
Protein Coding
Official Symbol
Cry2
Official Name
cryptochrome circadian regulator 2 [Source:RGD Symbol;Acc:620935]
Ensembl ID
ENSRNOG00000007478
Bio databases IDs NCBI: 170917 Ensembl: ENSRNOG00000007478
Aliases cryptochrome circadian regulator 2
Synonyms AV006279, cryptochrome circadian regulator 2, D130054K12Rik, HCRY2, PHLL2
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Cry2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • PRK10674
  • ligand-dependent nuclear receptor interactor
  • protein kinase binding
  • nucleic acid binding
  • enzyme
  • protein binding
  • sequence-specific DNA binding
  • cryptochrome, DASH family
  • DNA binding
  • FAD binding
  • protein phosphatase inhibitor activity
  • kinase binding
  • damaged DNA binding
  • single-stranded DNA binding
  • double-stranded DNA binding
  • cryptochrome, plant family
  • FAD binding domain of DNA photolyase
  • DNA photolyase
  • phosphatase binding

Pathways

Biological processes and signaling networks where the Cry2 gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • COVID-19
  • uterine leiomyoma
  • leiomyomatosis
  • diabetic nephropathy
  • impaired glucose tolerance
  • weight loss
  • arthritis
regulated by
regulates
  • D-glucose
  • IL1B
  • reporter gene
  • synthetic promoter
  • IL6
  • CRY1
  • BMAL1
  • corticosterone
  • PER2
  • CREB
role in cell
  • expression in
  • activation
  • function
  • number
  • phosphorylation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Cytoplasm
  • Extracellular Space
  • Mitochondria
  • cytosol
  • nucleoplasm
  • nuclear speckles

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Cry2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • photoreactive repair
  • lipid storage
  • blue light signaling pathway
  • circadian rhythm
  • regulation of circadian rhythm
  • response to light stimulus
  • negative regulation of circadian rhythm
  • negative regulation of transcription from RNA polymerase II promoter
  • negative regulation of phosphoprotein phosphatase activity
  • circadian regulation of gene expression
  • response to insulin stimulus
  • regulation of sodium-dependent phosphate transport
  • negative regulation of transcription, DNA-dependent
  • protein import into nucleus
  • glucose homeostasis
  • entrainment of circadian clock by photoperiod
  • response to activity
  • negative regulation of glucocorticoid secretion
  • negative regulation of glucocorticoid receptor signaling pathway

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoplasm
  • nuclear speck
  • mitochondrion
  • cytosol
  • extracellular region

Molecular Function

What the gene product does at the molecular level
  • FAD binding
  • phosphatase binding
  • protein kinase binding
  • ligand-dependent nuclear receptor binding
  • blue light photoreceptor activity
  • transcription regulatory region sequence-specific DNA binding
  • damaged DNA binding
  • single-stranded DNA binding
  • DNA binding
  • protein binding
  • DNA (6-4) photolyase activity
  • deoxyribodipyrimidine photo-lyase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.