Selenof Gene Summary [Rat]

The protein encoded by this gene belongs to the SEP15/selenoprotein M family. The exact function of this protein is not known; however, it has been found to associate with UDP-glucose:glycoprotein glucosyltransferase (UGTR), an endoplasmic reticulum(ER)-resident protein, which is involved in the quality control of protein folding. The association with UGTR retains this protein in the ER, where it may play a role in protein folding. Knockout studies in mice also suggest a role for this gene in cataract formation and colon carcinogenesis. This protein is a selenoprotein, containing the rare amino acid selenocysteine (Sec). Sec is encoded by the UGA codon, which normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon, rather than as a stop signal. [provided by RefSeq, Nov 2016]

Details

Type
Protein Coding
Official Symbol
Selenof
Official Name
selenoprotein F [Source:RGD Symbol;Acc:621291]
Ensembl ID
ENSRNOG00000055257
Bio databases IDs NCBI: 113922 Ensembl: ENSRNOG00000055257
Aliases selenoprotein F
Synonyms 9430015P09Rik, LOC100364801, LOC688284, SEL15, selenoprotein F, SEP15
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Selenof often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Sep15/SelM redox domain
  • thioredoxin peroxidase
  • enzyme
  • protein binding
  • selenium binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • Parkinson disease
  • myocardial infarction
  • cataract disease
regulated by
  • CD 437
  • imipramine
  • PLX5622
  • ST1926
  • selenium
regulates
role in cell
  • degradation in
  • abnormal morphology

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • Endoplasmic Reticulum
  • endoplasmic reticulum lumen

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Selenof gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • 'de novo' posttranslational protein folding
  • sperm chromatin condensation

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum lumen

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • selenium binding
  • oxidoreductase activity
  • thioredoxin peroxidase activity

Gene-Specific Assays for Results You Can Trust

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