CDH12

CDH12 Gene Summary

This gene encodes a type II classical cadherin of the cadherin superfamily. Alternative splicing of this gene results in multiple transcript variants. At least one of these variants encodes a preproprotein that is proteolytically processed to generate the mature cadherin protein. These integral membrane proteins mediate calcium-dependent cell-cell adhesion and are composed of a large N-terminal extracellular domain, a single membrane-spanning domain, and a small, highly conserved C-terminal cytoplasmic domain. Type II (atypical) cadherins are defined based on their lack of a histidine-alanine-valine (HAV) cell adhesion recognition sequence specific to type I cadherins. This particular cadherin appears to be expressed specifically in the brain and its temporal pattern of expression would be consistent with a role during a critical period of neuronal development, perhaps specifically during synaptogenesis. [provided by RefSeq, Nov 2015]

Details

Type
Protein Coding
Official Symbol
CDH12
Official Name
cadherin 12 [Source:HGNC Symbol;Acc:HGNC:1751]
Ensembl ID
ENSG00000154162
Bio databases IDs NCBI: 1010 Ensembl: ENSG00000154162
Aliases cadherin 12
Synonyms
Br-cadherin,cadherin 12,CDHB,N-cadherin 2,RGD1566350
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Bacterial cadherin-like domain
  • Cadherin, Y-type LIR-motif
  • Cadherin repeat-like domain

Pathways

Biological processes and signaling networks where the CDH12 gene plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • CTNNB1
  • CDH8
  • CHEK2
  • PLK1
  • CTNNA3
  • CDC20B
  • DHX16
  • EIF1AX
  • RIOK2
  • PKP4
disease
  • hypertension
  • focal segmental glomerulosclerosis
  • plasma cell myeloma
  • kidney injury
  • disorder of pregnancy
  • breast carcinoma
  • ocular sarcoidosis
regulated by
  • GLIS3
  • PGR
  • SYK
  • Org 2058
  • PRKCSH
  • estrogen receptor
  • AHCY
  • EWSR1
regulates
  • HAMP
role in cell

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cellular membrane
  • plasma

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the CDH12 gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • calcium-dependent cell-cell adhesion
  • adherens junction organization
  • cell-cell junction assembly
  • multicellular organismal development
  • cell-cell adhesion mediated by cadherin
  • cell morphogenesis
  • homophilic cell adhesion
  • cell migration

CELLULAR COMPONENT

Where in the cell the gene product is active
  • adherens junction
  • catenin complex
  • plasma membrane

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • cadherin binding
  • calcium ion binding
  • beta-catenin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.