COL6A2 Gene Summary [Human]

This gene encodes one of the three alpha chains of type VI collagen, a beaded filament collagen found in most connective tissues. The product of this gene contains several domains similar to von Willebrand Factor type A domains. These domains have been shown to bind extracellular matrix proteins, an interaction that explains the importance of this collagen in organizing matrix components. Mutations in this gene are associated with Bethlem myopathy and Ullrich scleroatonic muscular dystrophy. Three transcript variants have been identified for this gene. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
COL6A2
Official Name
collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
Ensembl ID
ENSG00000142173
Bio databases IDs NCBI: 1292 Ensembl: ENSG00000142173
Aliases collagen type VI alpha 2 chain
Synonyms BTHLM1, BTHLM1B, COL6A2 isoform 1, collagen, type VI, alpha 2, collagen type VI alpha 2 chain, collagen, type VI, α 2, collagen type VI α 2 chain, PP3610, PROCOLLAGEN type VI alpha2, UCMD1, UCMD1B
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human COL6A2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • extracellular matrix structural constituent conferring tensile strength
  • triple helical domain
  • von Willebrand factor (vWF) type A domain
  • vWFA
  • collagen binding
  • Collagen triple helix repeat (20 copies)
  • protein binding
  • von Willebrand factor type A domain

Pathways

Biological processes and signaling networks where the COL6A2 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • hepatocellular carcinoma
  • epithelial cancer
  • cancer
  • colorectal cancer
  • Ullrich congenital muscular dystrophy
  • lymphomagenesis
  • cutaneous melanoma
  • cutaneous melanoma cancer
  • Bethlem myopathy type 1
  • myosclerosis myopathy
regulated by
regulates
role in cell
  • expression in
  • apoptosis
  • proliferation
  • growth
  • assembly in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space
  • cellular membrane
  • lipid droplets
  • endoplasmic reticulum lumen
  • sarcolemma
  • extracellular matrix

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human COL6A2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • response to glucose stimulus
  • protein kinase B signaling cascade
  • response to UV
  • cell adhesion
  • neuron apoptotic process

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum lumen
  • extracellular space
  • extracellular vesicular exosome
  • collagen
  • sarcolemma
  • macromolecular complex
  • extracellular region

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • collagen binding
  • extracellular matrix structural constituent conferring tensile strength

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.