SCP2 Gene Summary [Human]

This gene encodes two proteins: sterol carrier protein X (SCPx) and sterol carrier protein 2 (SCP2), as a result of transcription initiation from 2 independently regulated promoters. The transcript initiated from the proximal promoter encodes the longer SCPx protein, and the transcript initiated from the distal promoter encodes the shorter SCP2 protein, with the 2 proteins sharing a common C-terminus. Evidence suggests that the SCPx protein is a peroxisome-associated thiolase that is involved in the oxidation of branched chain fatty acids, while the SCP2 protein is thought to be an intracellular lipid transfer protein. This gene is highly expressed in organs involved in lipid metabolism, and may play a role in Zellweger syndrome, in which cells are deficient in peroxisomes and have impaired bile acid synthesis. Alternative splicing of this gene produces multiple transcript variants, some encoding different isoforms.[provided by RefSeq, Aug 2010]

Details

Type
Protein Coding
Official Symbol
SCP2
Official Name
sterol carrier protein 2 [Source:HGNC Symbol;Acc:HGNC:10606]
Ensembl ID
ENSG00000116171
Bio databases IDs NCBI: 6342 Ensembl: ENSG00000116171
Aliases sterol carrier protein 2
Synonyms C76618, mThiol, NLTP, NSLIPTR, NSL-TP, SCOX, Scp, SCP-CHI, SCP-X, sterol carrier protein 2, sterol carrier protein 2, liver
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SCP2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Thiolase, N-terminal domain
  • acetyl-CoA acetyltransferases
  • cholesterol binding
  • phospholipid transporter
  • fatty acid binding
  • SCP-2 sterol transfer family
  • propanoyl-CoA C-acyltransferase
  • propionyl-CoA C2-trimethyltridecanoyltransferase
  • phosphatidylinositol transporter
  • acetyl-CoA C-myristoyltransferase
  • protein binding
  • receptor binding
  • identical protein binding
  • lipid transporter
  • cond_enzymes
  • acetyl-CoA C-acyltransferase
  • binding protein
  • phosphatidylcholine transporter
  • acyl-CoA binding
  • transporter

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • liver cancer
  • peripheral arterial disease
  • SCPx deficiency
  • osteoarthritis
  • hypolipidemia
  • weight loss
  • Alzheimer disease
  • progressive familial intrahepatic cholestasis type 1
  • atherosclerosis
  • edema
regulated by
  • oleic acid
  • palmitic acid
  • acetaminophen
  • pirinixic acid
  • Insulin
  • pregnenolone carbonitrile
  • HNF4A
  • LEP
  • IGF1R
  • INSR
regulates
  • lipid
  • LDL/cholesterol
  • cholesterol
  • HMGCR
  • triacylglycerol
  • HDL/cholesterol
  • SOAT1
  • sterol
  • PDZK1IP1
  • HDL-cholesteryl esters
role in cell
  • apoptosis
  • proliferation
  • number
  • abnormal morphology
  • fluidity
  • hydrolysis in
  • cell death
  • structure

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • microsomal fraction
  • membrane fraction
  • mitochondrial fraction
  • peroxisomal matrix
  • cholesterol-rich microdomain
  • perinuclear region
  • Plasma Membrane
  • Golgi Apparatus
  • Endoplasmic Reticulum
  • Mitochondria
  • cytosol
  • peroxisome membrane
  • nucleoplasm
  • peroxisomes
  • membrane rafts
  • peroxisome-enriched fraction
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SCP2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • fatty acid beta-oxidation
  • fatty acid beta-oxidation using acyl-CoA oxidase
  • positive regulation of intracellular cholesterol transport
  • alpha-linolenic acid metabolic process
  • phospholipid transport
  • intracellular cholesterol transport
  • bile acid biosynthetic process
  • bile acid metabolic process

Cellular Component

Where in the cell the gene product is active
  • peroxisome
  • membrane
  • mitochondrion
  • cytosol
  • endoplasmic reticulum
  • macromolecular complex
  • peroxisomal matrix
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • propanoyl-CoA C-acyltransferase activity
  • protein binding
  • acetyl-CoA C-acyltransferase activity
  • cholesterol binding
  • long-chain fatty acyl-CoA binding
  • fatty-acyl-CoA binding
  • oleic acid binding
  • receptor binding
  • propionyl-CoA C2-trimethyltridecanoyltransferase activity
  • acetyl-CoA C-myristoyltransferase activity

Gene-Specific Assays for Results You Can Trust

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