LYNX1 Gene Summary [Human]

This gene encodes a GPI-anchored, cell membrane bound member of the Ly6/uPAR (LU) superfamily of proteins containing the unique three-finger LU domain. This protein interacts with nicotinic acetylcholine receptors (nAChRs), and is thought to function as a modulator of nAChR activity to prevent excessive excitation. Alternatively spliced transcript variants have been found for this gene. Read-through transcription between this gene and the neighboring downstream gene (SLURP2) generates naturally-occurring transcripts (LYNX1-SLURP2) that encode a fusion protein comprised of sequence sharing identity with each individual gene product. [provided by RefSeq, Sep 2017]

Details

Type
Protein Coding
Official Symbol
LYNX1
Official Name
Ly6/neurotoxin 1 [Source:HGNC Symbol;Acc:HGNC:29604]
Ensembl ID
ENSG00000180155
Bio databases IDs NCBI: 66004 Ensembl: ENSG00000180155
Aliases Ly6/neurotoxin 1
Synonyms Ly6/neurotoxin 1, LY6/NEUROTOXIN-LIKE protein 1, SLURP-2
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human LYNX1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • ion channel inhibitor
  • acetylcholine receptor inhibitor
  • protein binding
  • receptor binding
  • TFP
  • acetylcholine receptor regulator
  • transporter

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • head and neck squamous cell carcinoma
  • head and neck squamous cell cancer
  • urothelial bladder carcinoma
  • transitional cell bladder cancer
  • renal clear cell adenocarcinoma
  • renal clear cell cancer
  • endometrial adenocarcinoma
  • endometrial adenocarcinoma formation
  • colon adenocarcinoma
  • colon epithelial cancer
regulated by
regulates
  • NACHR
  • Ca2+
  • nicotinic acetylcholine receptor
role in cell
  • activation
  • degeneration
  • formation
  • synaptic transmission
  • excitotoxicity
  • desensitization in
  • paired-pulse facilitation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • postsynaptic region
  • cellular membrane
  • dendrite initial segments
  • perikaryon

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human LYNX1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • synaptic transmission, cholinergic

Cellular Component

Where in the cell the gene product is active
  • dendrite
  • endoplasmic reticulum
  • synapse
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • acetylcholine receptor regulator activity
  • acetylcholine receptor binding
  • acetylcholine receptor inhibitor activity
  • ion channel inhibitor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.