Gapdh Gene Summary [Mouse]

This gene encodes a member of the glyceraldehyde-3-phosphate dehydrogenase protein family. The encoded protein has been identified as a moonlighting protein based on its ability to perform mechanistically distinct functions. The encoded protein was originally identified as a key glycolytic enzyme that converts D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Subsequent studies have assigned a variety of additional functions to the protein including nitrosylation of nuclear proteins, the regulation of mRNA stability, and acting as a transferrin receptor on the cell surface of macrophage. Alternative splicing results in multiple transcript variants. Many pseudogenes similar to this locus are found throughout the mouse genome. [provided by RefSeq, Jan 2014]

Details

Type
Retained Intron
Official Symbol
Gapdh
Official Name
glyceraldehyde-3-phosphate dehydrogenase [Source:MGI Symbol;Acc:MGI:95640]
Ensembl ID
ENSMUSG00000057666
Bio databases IDs NCBI: 14433 Ensembl: ENSMUSG00000057666
Aliases glyceraldehyde-3-phosphate dehydrogenase
Synonyms 1,3-Bgd, BARS-38, G3P, G3PD, G3PDH, GAPD, glyceraldehyde-3-phosphate dehydrogenase, HEL-S-162eP, LOC14433, NUCLEAR URACIL DNA GLYCOSYLASE
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Gapdh often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Rossmann-fold NAD(P)(+)-binding proteins
  • glyceraldehyde-3-phosphate dehydrogenase, type I
  • rossmann fold
  • GAPDH-like_N
  • aspartic protease inhibitor
  • catalytic domain
  • Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
  • enzyme binding
  • protein domain specific binding
  • enzyme
  • protein binding
  • identical protein binding
  • glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
  • NAD binding domain
  • nitrogenous group transferase
  • microtubule binding
  • GAPDH_like_C
  • Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

Pathways

Biological processes and signaling networks where the Gapdh gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • non-insulin-dependent diabetes mellitus
  • neoplasia
  • glaucoma
  • head and neck squamous cell cancer
  • acute respiratory distress syndrome
  • Alzheimer disease
  • allergic pulmonary eosinophilia
  • neurodegeneration
  • plaque psoriasis
  • severe acute respiratory syndrome
regulated by
  • dexamethasone
  • TP53
  • deoxycholate
  • BCR (complex)
  • ibrutinib
  • PKM
  • HIF1A
  • LEP
  • hydrogen peroxide
  • PTEN
regulates
  • p38 MAPK
  • PKM
  • fructose-6-phosphate
  • taurocholic acid
  • (L)-valerylcarnitine
  • NFkB (complex)
  • IFNG
  • TNF
  • PTGS2
  • glutathione
role in cell
  • binding
  • expression in
  • proliferation
  • cell viability
  • growth
  • cell death
  • activation in
  • phosphorylation in
  • invasion by
  • differentiation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • myelin enriched fraction
  • nuclear fraction
  • soluble fraction
  • postsynaptic density (PSD) fractions
  • membrane fraction
  • pH resistant lipid raft fraction
  • detergent resistant lipid raft fraction
  • glutaminergic synapse
  • microtubule cytoskeleton
  • intracellular membrane-bounded organelle
  • extracellular vesicles
  • organelle
  • cell surface
  • cellular membrane
  • Nucleus
  • Plasma Membrane
  • endosomes
  • vesicles
  • lysosome
  • Mitochondria
  • polysomes
  • lipid droplets
  • cytosol
  • perinuclear space
  • nuclear envelope
  • membrane rafts
  • exosomes
  • clathrin-coated vesicles
  • phagosomes
  • endosomes and endoplasmic reticulum fractions
  • cytoplasmic fraction
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Gapdh gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • positive regulation of type I interferon production
  • glycolysis
  • positive regulation of I-kappaB kinase/NF-kappaB cascade
  • microtubule cytoskeleton organization
  • glucose metabolic process
  • killing by host of symbiont cells
  • peptidyl-cysteine S-trans-nitrosylation
  • regulation of macroautophagy
  • killing of cells of other organism
  • negative regulation of endopeptidase activity
  • cellular response to interferon-gamma
  • defense response to fungus
  • protein stabilization
  • positive regulation of cytokine production
  • negative regulation of translation
  • neuron apoptotic process

Cellular Component

Where in the cell the gene product is active
  • microtubule cytoskeleton
  • plasma membrane
  • lipid particle
  • nucleus
  • nuclear membrane
  • perinuclear region of cytoplasm
  • extracellular vesicular exosome
  • cytoplasm
  • intracellular membrane-bounded organelle
  • membrane
  • cytosol
  • vesicle

Molecular Function

What the gene product does at the molecular level
  • identical protein binding
  • NADP binding
  • protein binding
  • NAD binding
  • aspartic-type endopeptidase inhibitor activity
  • peptidyl-cysteine S-nitrosylase activity
  • glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
  • microtubule binding

Gene-Specific Assays for Results You Can Trust

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