RGD1305178 Gene Summary [Rat]
Predicted to enable U5 snRNA binding activity. Predicted to be involved in mRNA cis splicing, via spliceosome and regulation of homologous chromosome segregation. Predicted to be located in chromosome, centromeric region; cytosol; and nucleoplasm. Predicted to be part of spliceosomal complex. Orthologous to human C9orf78 (chromosome 9 open reading frame 78). [provided by Alliance of Genome Resources, Jul 2025]
Details
| Type | Retained Intron |
| Official Symbol | RGD1305178 |
| Official Name | similar to Hypothetical protein MGC11690 [Source:RGD Symbol;Acc:1305178] |
| Ensembl ID | ENSRNOG00000007532 |
| Bio databases IDs | |
| Aliases | similar to Hypothetical protein MGC11690 |
| Synonyms | bA409K20.3, BC005624, C3h9orf78, cDNA sequence BC005624, chromosome 9 open reading frame 78, CSU2, HCA59, HSPC220, LOC51759, RGD1305178, similar to human chromosome 9 open reading frame 78, TLS1 |
| Species | Rat, Rattus norvegicus |
| Orthologies |
Protein Domains
A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Rgd1305178 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
- U5 snRNA binding
- Hepatocellular carcinoma-associated antigen 59
- protein binding
Top Findings
The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
Subcellular Expression
Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
- Nucleus
- cytosol
- nucleoplasm
- centromeres
Gene Ontology Annotations
Describes the biological processes, cellular components, and molecular functions associated with the rat Rgd1305178 gene, providing context for its role in the cell.
Biological Process
Functions and activities the gene product is involved in
- nuclear mRNA cis splicing, via spliceosome
- regulation of homologous chromosome segregation
- chromosome segregation
- nuclear mRNA splicing, via spliceosome
Cellular Component
Where in the cell the gene product is active
- nucleus
- spliceosomal complex
- cytosol
- chromosome, centromeric region
- nucleoplasm
Molecular Function
What the gene product does at the molecular level
- U5 snRNA binding
- protein binding