Zmat2 Gene Summary [Rat]

Predicted to enable DNA binding activity and zinc ion binding activity. Involved in mRNA splicing, via spliceosome. Located in nucleus. Part of U2-type precatalytic spliceosome. [provided by Alliance of Genome Resources, Apr 2022]

Details

Type
Protein Coding
Official Symbol
Zmat2
Official Name
zinc finger, matrin type 2 [Source:RGD Symbol;Acc:1583592]
Ensembl ID
ENSRNOG00000016016
Bio databases IDs NCBI: 679898 Ensembl: ENSRNOG00000016016
Aliases zinc finger, matrin type 2
Synonyms 2610510D14Rik, 2900082I05Rik, LOC683048, Ptg-12, Snu23, zinc finger matrin-type 2, zinc finger, matrin type 2
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Zmat2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Zinc-finger double-stranded RNA-binding
  • U1 zinc finger
  • protein binding
  • Zinc-finger of C2H2 type

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
regulated by
  • MYC
  • Major late
  • rebemadlin
role in cell
  • splicing by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • spliceosomes
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Zmat2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • nuclear mRNA splicing, via spliceosome

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • U4/U6 x U5 tri-snRNP complex
  • U2-type precatalytic spliceosome
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • zinc ion binding
  • protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.