H2bc1 Gene Summary [Rat]

Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Nucleosomes consist of approximately 146 bp of DNA wrapped around a histone octamer composed of pairs of each of the four core histones (H2A, H2B, H3, and H4). The chromatin fiber is further compacted through the interaction of a linker histone, H1, with the DNA between the nucleosomes to form higher order chromatin structures. This gene is intronless and encodes a replication-dependent histone that is a testis/sperm-specific member of the histone H2B family. Transcripts from this gene contain a palindromic termination element. [provided by RefSeq, Aug 2015]

Details

Type
Protein Coding
Official Symbol
H2bc1
Official Name
H2B clustered histone 1 [Source:RGD Symbol;Acc:3855]
Ensembl ID
ENSRNOG00000016865
Bio databases IDs NCBI: 24829 Ensembl: ENSRNOG00000016865
Aliases H2B clustered histone 1
Synonyms bA317E16.3, H2B clustered histone 1, H2BFU, HIST1H2BA, histone, hTSH2B, STBP, TH2B, TSH2B, TSH2B.1
Species
Rat, Rattus norvegicus
OrthologiesHuman

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat H2bc1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • histone fold domain (HFD) superfamily
  • histone binding
  • Core histone H2A/H2B/H3/H4
  • DNA binding
  • Histone H2B

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
regulated by
role in cell
  • transformation
  • assembly
  • transformation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • cell surface
  • nucleosomes
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat H2bc1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • inflammatory response
  • mononuclear cell migration
  • chromosome organization
  • plasminogen activation
  • sperm chromatin condensation
  • nucleosome disassembly
  • nucleosome assembly

Cellular Component

Where in the cell the gene product is active
  • female germ cell nucleus
  • chromosome, telomeric region
  • nucleus
  • nucleosome
  • nucleoplasm
  • cell surface

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • structural constituent of chromatin
  • protein heterodimerization activity
  • histone binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.