Ikzf5 Gene Summary [Rat]

Members of the Ikaros (ZNFN1A1; MIM 603023) family of transcription factors, which includes Pegasus, are expressed in lymphocytes and are implicated in the control of lymphoid development.[supplied by OMIM, Jul 2002]

Details

Type
Protein Coding
Official Symbol
Ikzf5
Official Name
IKAROS family zinc finger 5 [Source:RGD Symbol;Acc:1310965]
Ensembl ID
ENSRNOG00000025651
Bio databases IDs NCBI: 309031 Ensembl: ENSRNOG00000025651
Aliases IKAROS family zinc finger 5
Synonyms 2610034F18Rik, IKAROS family zinc finger 5, PEGASUS, THC7, Zfpn1a5, ZNFN1A5
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Ikzf5 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • transcription regulator
  • RNA polymerase II transcription regulatory region sequence-specific binding transcriptional repressor activity
  • zinc ion binding
  • double-stranded DNA binding
  • nucleic acid binding
  • Zinc-finger double domain
  • protein domain specific binding
  • chromatin binding
  • protein binding
  • sequence-specific DNA binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • thrombocytopenia type 7
regulated by
  • Lmp2a
regulates
  • DNA promoter
  • DNA endogenous promoter
  • RNA polymerase II
role in cell
  • production

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Ikzf5 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • negative regulation of transcription from RNA polymerase II promoter
  • regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • macromolecular complex

Molecular Function

What the gene product does at the molecular level
  • protein domain specific binding
  • sequence-specific DNA binding transcription factor activity
  • zinc ion binding
  • protein binding
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • RNA polymerase II regulatory region sequence-specific DNA binding
  • chromatin binding
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.