VMP1 Gene Summary [Human]

This gene encodes a transmembrane protein that plays a key regulatory role in the process of autophagy. The ectopic overexpression of the encoded protein in cultured cells triggers autophagy even under nutrient-rich conditions. This gene is overexpressed in pancreatitis affected acinar cells where the encoded protein mediates sequestration and degradation of potentially deleterious activated zymogen granules in a process termed, zymophagy. [provided by RefSeq, Jul 2016]

Details

Type
Processed Transcript
Official Symbol
VMP1
Official Name
vacuole membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:29559]
Ensembl ID
ENSG00000062716
Bio databases IDs NCBI: 81671 Ensembl: ENSG00000062716
Aliases vacuole membrane protein 1, ectopic P-granules autophagy protein 3 homolog (C. elegans), transport and golgi organization 5 homolog (Drosophila)
Synonyms 3110098I04RIK, 4930579A11RIK, DKFZp566I133, EPG3, mir-21a, ni-2, TANGO5, TMEM49, vacuole membrane protein 1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human VMP1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • phospholipid scramblase
  • SNARE associated Golgi protein
  • protein binding
  • transporter

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • multiple sclerosis
  • glioblastoma
  • glioblastoma cancer
  • major depression
  • iron deficiency anemia
  • abdominal aortic aneurysm
  • idiopathic dilated cardiomyopathy
  • breast carcinoma
  • calcium overload
  • chronic lymphocytic leukemia
regulated by
regulates
  • Ca2+
  • NFkB (complex)
  • PI3K (complex)
  • LIPOPROTEIN
role in cell
  • apoptosis
  • activation in
  • growth
  • assembly
  • generation in
  • generation
  • autophagy by
  • docking
  • endoplasmic reticulum stress response in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • cellular membrane
  • Endoplasmic Reticulum
  • endoplasmic reticulum membrane
  • nucleoli
  • autophagic vacuoles

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human VMP1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • autophagic vacuole assembly
  • autophagy
  • Golgi organization
  • autophagic vacuole docking
  • phospholipid scrambling
  • cell junction assembly
  • embryo implantation
  • lipoprotein transport

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum membrane
  • pre-autophagosomal structure
  • membrane
  • endomembrane system
  • endoplasmic reticulum
  • nucleolus
  • plasma membrane
  • autophagic vacuole membrane
  • endoplasmic reticulum-Golgi intermediate compartment membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • phospholipid scramblase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.