SHFL Gene Summary [Human]

This gene is an interferon stimulated gene (ISG) that inhibits viral replication. The encoded protein binds nucleic acids and inhibits programmed -1 ribosomal frameshifting required for translation by many RNA viruses. Viruses inhibited by the protein include Zika virus, dengue virus and the coronaviruses, SARS-CoV and SARS-CoV2. [provided by RefSeq, Aug 2021]

Details

Type
Retained Intron
Official Symbol
SHFL
Official Name
shiftless antiviral inhibitor of ribosomal frameshifting [Source:HGNC Symbol;Acc:HGNC:25649]
Ensembl ID
ENSG00000130813
Bio databases IDs NCBI: 55337 Ensembl: ENSG00000130813
Aliases shiftless antiviral inhibitor of ribosomal frameshifting, repressor of yield of Dengue virus, interferon-regulated antiviral gene, shiftless
Synonyms A230050P20Rik, C19orf66, FLJ11286, IRAV, RyDEN, SFL, shiftless antiviral inhibitor of ribosomal frameshifting
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SHFL often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • mRNA binding
  • Uncharacterized protein UPF0515
  • ribosome binding
  • protein binding
  • identical protein binding
  • RNA binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
regulated by
  • lipopolysaccharide
  • TNF
  • IFNG
  • IFNL1
  • IFNA2
  • distal lung epithelial cells
  • Zaire ebolavirus
  • STING1
  • Marburg virus
  • Human cytomegalovirus

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • cytoplasmic mRNA processing body
  • Cytoplasm
  • Nucleus
  • cytosol
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SHFL gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of translational termination
  • response to type III interferon
  • response to interferon-gamma
  • innate immune response
  • response to type I interferon
  • defense response to virus
  • response to interferon-beta
  • negative regulation of viral genome replication
  • negative regulation of translational frameshifting

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoplasm
  • cytosol
  • cytoplasmic mRNA processing body
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • RNA binding
  • ribosome binding

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