GALNT1 Gene Summary [Human]

This gene encodes a member of the UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase (GalNAc-T) family of enzymes. GalNAc-Ts initiate mucin-type O-linked glycosylation in the Golgi apparatus by catalyzing the transfer of GalNAc to serine and threonine residues on target proteins. They are characterized by an N-terminal transmembrane domain, a stem region, a lumenal catalytic domain containing a GT1 motif and Gal/GalNAc transferase motif, and a C-terminal ricin/lectin-like domain. GalNAc-Ts have different, but overlapping, substrate specificities and patterns of expression. Transcript variants derived from this gene that utilize alternative polyA signals have been described in the literature. [provided by RefSeq, Jul 2008]

Details

Type
Processed Transcript
Official Symbol
GALNT1
Official Name
polypeptide N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4123]
Ensembl ID
ENSG00000141429
Bio databases IDs NCBI: 2589 Ensembl: ENSG00000141429
Aliases polypeptide N-acetylgalactosaminyltransferase 1, protein-UDP acetylgalactosaminyltransferase 1, polypeptide GalNAc transferase 1
Synonyms GALNAC-T1, polypeptide N-acetylgalactosaminyltransferase 1, pp-Galnac-T1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human GALNT1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Ricin-type beta-trefoil lectin domain
  • Glycosyl transferase family 2
  • Ricin-type beta-trefoil
  • cytoplasmic domain
  • polypeptide N-acetylgalactosaminyltransferase
  • enzyme
  • manganese ion binding
  • Glycosyltransferase like family 2
  • ricin B-type lectin domain, beta-trefoil fold
  • glycosyltransferase family A

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • pervasive developmental disorder
  • hypoplasia
  • hypoalbuminemia
  • systemic juvenile idiopathic arthritis
  • hyperplasia
  • stenosis
  • aortic regurgitation
  • bladder neoplasia
regulated by
regulates
role in cell
  • cell rolling
  • activation in
  • adhesion
  • number
  • proliferation
  • morphology
  • accumulation in
  • transmigration
  • distribution in
  • O-glycosylation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • pH resistant lipid raft fraction
  • detergent resistant lipid raft fraction
  • perinuclear region
  • cellular membrane
  • Golgi Apparatus
  • endoplasmic reticulum membrane
  • Golgi membrane
  • plasma

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human GALNT1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • viral protein processing
  • protein O-linked glycosylation
  • protein O-linked glycosylation via serine
  • protein O-linked glycosylation via threonine
  • O-glycan processing

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum membrane
  • perinuclear region of cytoplasm
  • Golgi cisterna membrane
  • membrane
  • Golgi apparatus
  • Golgi membrane
  • extracellular region
  • endoplasmic reticulum-Golgi intermediate compartment membrane

Molecular Function

What the gene product does at the molecular level
  • manganese ion binding
  • carbohydrate binding
  • polypeptide N-acetylgalactosaminyltransferase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.