APEX2 Gene Summary [Human]

Apurinic/apyrimidinic (AP) sites occur frequently in DNA molecules by spontaneous hydrolysis, by DNA damaging agents or by DNA glycosylases that remove specific abnormal bases. AP sites are pre-mutagenic lesions that can prevent normal DNA replication so the cell contains systems to identify and repair such sites. Class II AP endonucleases cleave the phosphodiester backbone 5' to the AP site. This gene encodes a protein shown to have a weak class II AP endonuclease activity. Most of the encoded protein is located in the nucleus but some is also present in mitochondria. This protein may play an important role in both nuclear and mitochondrial base excision repair. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2012]

Details

Type
Protein Coding
Official Symbol
APEX2
Official Name
apurinic/apyrimidinic endodeoxyribonuclease 2 [Source:HGNC Symbol;Acc:HGNC:17889]
Ensembl ID
ENSG00000169188
Bio databases IDs NCBI: 27301 Ensembl: ENSG00000169188
Aliases apurinic/apyrimidinic endodeoxyribonuclease 2, zinc finger, GRF-type containing 2
Synonyms APE2, APEXL2, apurinic/apyrimidinic endodeoxyribonuclease 2, apurinic/apyrimidinic endonuclease 2, C430040P13Rik, XTH2, ZGRF2
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human APEX2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
  • Endonuclease/Exonuclease/phosphatase family
  • GRF zinc finger
  • enzyme
  • protein binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • growth failure
regulated by
role in cell
  • proliferation
  • number
  • growth
  • sensitivity
  • formation
  • formation in
  • cohesion in
  • cohesion
  • cell survival

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • fibrillar center
  • intracellular membrane-bounded organelle
  • Mitochondria
  • mitochondrial inner membrane
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human APEX2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • base-excision repair
  • DNA recombination

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • intracellular membrane-bounded organelle
  • mitochondrion
  • fibrillar center
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • zinc ion binding
  • protein binding
  • endonuclease activity
  • double-stranded DNA specific 3'-5' exodeoxyribonuclease activity
  • DNA-(apurinic or apyrimidinic site) lyase activity
  • phosphoric diester hydrolase activity

Gene-Specific Assays for Results You Can Trust

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