SLC22A5 Gene Summary [Human]

Polyspecific organic cation transporters in the liver, kidney, intestine, and other organs are critical for elimination of many endogenous small organic cations as well as a wide array of drugs and environmental toxins. The encoded protein is a plasma integral membrane protein which functions both as an organic cation transporter and as a sodium-dependent high affinity carnitine transporter. The encoded protein is involved in the active cellular uptake of carnitine. Mutations in this gene are the cause of systemic primary carnitine deficiency (CDSP), an autosomal recessive disorder manifested early in life by hypoketotic hypoglycemia and acute metabolic decompensation, and later in life by skeletal myopathy or cardiomyopathy. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Apr 2015]

Details

Type
Protein Coding
Official Symbol
SLC22A5
Official Name
solute carrier family 22 member 5 [Source:HGNC Symbol;Acc:HGNC:10969]
Ensembl ID
ENSG00000197375
Bio databases IDs NCBI: 6584 Ensembl: ENSG00000197375
Aliases solute carrier family 22 member 5
Synonyms CDSP, CT1, High Affinity Carnitine Transporter, jvs, Lstpl, OCTN2, solute carrier family 22 member 5, solute carrier family 22 (organic cation transporter), member 5, UST2r
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SLC22A5 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • benzoate transport
  • sodium ion transporter
  • MFS transporter, sugar porter (SP) family
  • Major Facilitator Superfamily
  • Multidrug resistance protein
  • protein binding
  • betaine transporter
  • PDZ-domain binding
  • organic cation transporter
  • Sugar (and other) transporter
  • carnitine transporter
  • cation transport protein
  • transporter

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • diabetes mellitus
  • asthma
  • organismal death
  • COVID-19
  • primary systemic carnitine deficiency
  • hereditary disorder
  • presynaptic congenital myasthenic syndrome type 20
  • myelodysplastic syndrome
  • inflammatory bowel disease
  • cardiovascular disorder
regulated by
  • EGFR
  • mibolerone
  • ERBB2
  • fulvestrant
  • gentamicin
  • beta-estradiol
  • trans-hydroxytamoxifen
  • cisplatin
  • agmatine
  • Na+
regulates
role in cell
  • cellular infiltration by
  • apoptosis
  • quantity
  • production in
  • organization
  • metabolism in
  • beta-oxidation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • Cytoplasm
  • cellular membrane
  • vesicles
  • Endoplasmic Reticulum
  • cytosol
  • apical membrane
  • basolateral membrane
  • basal membrane
  • brush border

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SLC22A5 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • quaternary ammonium group transport
  • sodium ion transport
  • sodium-dependent organic cation transport
  • (R)-carnitine transport
  • response to interferon-gamma
  • response to symbiotic bacterium
  • carnitine transport
  • positive regulation of intestinal epithelial structure maintenance
  • response to tumor necrosis factor

Cellular Component

Where in the cell the gene product is active
  • basal plasma membrane
  • brush border membrane
  • extracellular vesicular exosome
  • cytoplasm
  • cytosol
  • endoplasmic reticulum
  • plasma membrane
  • apical plasma membrane

Molecular Function

What the gene product does at the molecular level
  • xenobiotic transporter activity
  • ATP binding
  • protein binding
  • quaternary ammonium group transmembrane transporter activity
  • betaine transmembrane transporter activity
  • PDZ domain binding
  • symporter activity
  • carnitine transporter activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.