PDZK1 Gene Summary [Human]

This gene encodes a PDZ domain-containing scaffolding protein. PDZ domain-containing molecules bind to and mediate the subcellular localization of target proteins. The encoded protein mediates the localization of cell surface proteins and plays a critical role in cholesterol metabolism by regulating the HDL receptor, scavenger receptor class B type 1. Single nucleotide polymorphisms in this gene may be associated with metabolic syndrome, and overexpression of this gene may play a role in drug resistance of multiple myeloma. Pseudogenes of this gene are located on the long arm of chromosome 1. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jan 2011]

Details

Type
Processed Transcript
Official Symbol
PDZK1
Official Name
PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:8821]
Ensembl ID
ENSG00000174827
Bio databases IDs NCBI: 5174 Ensembl: ENSG00000174827
Aliases PDZ domain containing 1
Synonyms 1700023D20Rik, 2610507N21Rik, 4921513F16Rik, CAP70, CLAMP, D3Ertd537e, mPDZK1, naPi-Cap1, NHERF-3, PDZD1, PDZ domain containing 1, Sodium sulfate cotransporter, Sodium sulphate cotransporter
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human PDZK1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Domain present in PSD-95, Dlg, and ZO-1/2
  • binding protein
  • scavenger receptor binding
  • canonical PDZ domain
  • protein binding
  • PDZ domain
  • cpPDZ_Deg_HtrA-like
  • cpPDZ_RseP_YlbL-like
  • PDZ-domain binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • squamous cell cancer
  • psoriasis
  • squamous-cell carcinoma
  • intellectual disability and developmental delay
  • Wilms tumor
  • Wilms tumorigenesis
  • gout
  • global developmental delay with intellectual disability
  • trigonocephaly
regulated by
regulates
role in cell
  • expression in
  • activation in
  • phosphorylation in
  • binding in
  • cell death
  • inhibition in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • detergent-soluble membrane fractions
  • membrane fraction
  • Cytoplasm
  • cell surface
  • cell periphery
  • perinuclear region
  • cellular membrane
  • cytosol
  • apical membrane
  • basolateral membrane
  • brush border
  • microvilli
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human PDZK1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • positive regulation of protein targeting to membrane
  • carnitine transport
  • positive regulation of ion transmembrane transporter activity
  • regulation of anion transport
  • protein localization in plasma membrane

Cellular Component

Where in the cell the gene product is active
  • microvillus membrane
  • extracellular vesicular exosome
  • brush border membrane
  • brush border
  • apical plasma membrane
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • protein anchor
  • PDZ domain binding
  • receptor binding
  • scavenger receptor binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.