Ptrh2 Gene Summary [Rat]

The protein encoded by this gene is a mitochondrial protein with two putative domains, an N-terminal mitochondrial localization sequence, and a UPF0099 domain. In vitro assays suggest that this protein possesses peptidyl-tRNA hydrolase activity, to release the peptidyl moiety from tRNA, thereby preventing the accumulation of dissociated peptidyl-tRNA that could reduce the efficiency of translation. This protein also plays a role regulating cell survival and death. It promotes survival as part of an integrin-signaling pathway for cells attached to the extracellular matrix (ECM), but also promotes apoptosis in cells that have lost their attachment to the ECM, a process called anoikos. After loss of cell attachment to the ECM, this protein is phosphorylated, is released from the mitochondria into the cytosol, and promotes caspase-independent apoptosis through interactions with transcriptional regulators. This gene has been implicated in the development and progression of tumors, and mutations in this gene have been associated with an infantile multisystem neurologic, endocrine, and pancreatic disease (INMEPD) characterized by intellectual disability, postnatal microcephaly, progressive cerebellar atrophy, hearing impairment, polyneuropathy, failure to thrive, and organ fibrosis with exocrine pancreas insufficiency (PMID: 25574476). Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Mar 2015]

Details

Type
Protein Coding
Official Symbol
Ptrh2
Official Name
peptidyl-tRNA hydrolase 2 [Source:RGD Symbol;Acc:1306819]
Ensembl ID
ENSRNOG00000004288
Bio databases IDs NCBI: 287593 Ensembl: ENSRNOG00000004288
Aliases peptidyl-tRNA hydrolase 2
Synonyms A230072I16Rik, BIT1, CFAP37, CGI-147, IMNEPD, peptidyl-tRNA hydrolase 2, PTH, PTH 2, RGD1306819
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Ptrh2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Peptidyl-tRNA hydrolase PTH2
  • aminoacyl-tRNA hydrolase
  • enzyme
  • protein binding
  • PTH2_family

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • dystrophy
  • infantile-onset multisystem neurologic, endocrine, and pancreatic disease type 1
  • runting
  • progressive muscle weakness
  • developmental delay
  • centronuclear myopathy
  • myopathy
  • ataxia
  • joint contracture
  • infantile-onset multisystem neurologic, endocrine and pancreatic disease
regulated by
  • IL2
  • D-glucose
  • NR3C1
  • PAGA
  • PXO1 122
  • mono-(2-ethylhexyl)phthalate
  • ATG5
  • ammonium
regulates
role in cell
  • cell death
  • apoptosis
  • number
  • abnormal morphology
  • anoikis
  • size

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • pH resistant lipid raft fraction
  • Mitochondria
  • cytosol
  • mitochondrial outer membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Ptrh2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • negative regulation of gene expression
  • negative regulation of anoikis
  • apoptotic process
  • positive regulation of anoikis

Cellular Component

Where in the cell the gene product is active
  • mitochondrion
  • membrane
  • cytosol
  • mitochondrial outer membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • aminoacyl-tRNA hydrolase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.