Lsm11 Gene Summary [Rat]

Predicted to enable U7 snRNA binding activity. Predicted to be involved in mRNA 3'-end processing by stem-loop binding activity and cleavage; positive regulation of G1/S transition of mitotic cell cycle; and regulation of chromatin organization. Predicted to be located in nuclear body. Predicted to be part of U7 snRNP; histone pre-mRNA 3'end processing complex; and telomerase holoenzyme complex. Human ortholog(s) of this gene implicated in Aicardi-Goutieres syndrome. Orthologous to human LSM11 (LSM11, U7 small nuclear RNA associated). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Lsm11
Official Name
LSM11, U7 small nuclear RNA associated [Source:RGD Symbol;Acc:1565523]
Ensembl ID
ENSRNOG00000005450
Bio databases IDs NCBI: 501688 Ensembl: ENSRNOG00000005450
Aliases LSM11, U7 small nuclear RNA associated
Synonyms 2210404M20RIK, AGS8, LSM11, U7 small nuclear RNA associated, RGD1565523, U7 snRNP-specific Sm-like protein LSM11
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Lsm11 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • snRNA binding
  • Sm and related proteins
  • protein binding

Pathways

Biological processes and signaling networks where the Lsm11 gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • Aicardi-Goutieres syndrome 8
regulated by
role in cell
  • organization

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nucleoplasm
  • nuclear bodies

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Lsm11 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • positive regulation of G1/S transition of mitotic cell cycle
  • histone mRNA 3'-end processing

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • nuclear body
  • histone pre-mRNA 3'end processing complex
  • U7 snRNP
  • telomerase holoenzyme complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • U7 snRNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.