Selenot Gene Summary [Rat]

This gene encodes a selenoprotein, containing a selenocysteine (Sec) residue at the active site. Sec is encoded by the UGA codon that normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon rather than as a stop signal. This protein is localized in the endoplasmic reticulum. It belongs to the SelWTH family that possesses a thioredoxin-like fold and a conserved CxxU (C is cysteine, U is Sec) motif found in several redox active proteins. Studies in rat indicate a role for this gene in the regulation of calcium homeostasis and smooth muscle contraction. High induction of this gene is also associated with ontogenetic and regenerative processes in nervous, endocrine, and metabolic tissues. A pseudogene of this locus has been identified on chromosome 4. [provided by RefSeq, Aug 2017]

Details

Type
Protein Coding
Official Symbol
Selenot
Official Name
selenoprotein T [Source:RGD Symbol;Acc:1359128]
Ensembl ID
ENSRNOG00000013507
Bio databases IDs NCBI: 365802 Ensembl: ENSRNOG00000013507
Aliases selenoprotein T
Synonyms 2810407C02Rik, 5730408P04Rik, selenoprotein T, SELT, Sept
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Selenot often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Rdx family
  • enzyme
  • thioredoxin-disulfide reductase

Pathways

Biological processes and signaling networks where the Selenot gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
regulated by
  • trichostatin A
  • EZH2
  • Ca2+
  • pituitary adenylate cyclase-activating polypeptide
  • TXNRD1
  • ADCYAP1
  • selenium
  • bucladesine
regulates
  • reactive oxygen species
  • Ca2+
  • malondialdehyde
  • CAT
  • GH1
  • NOX4
  • D-glucose
  • growth hormone
  • SOD1
role in cell
  • expression in
  • apoptosis
  • production in
  • elevation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • Endoplasmic Reticulum
  • endoplasmic reticulum membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Selenot gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • response to glucose stimulus
  • insulin secretion involved in cellular response to glucose stimulus
  • positive regulation of growth hormone secretion
  • selenocysteine incorporation
  • glucose homeostasis
  • cell redox homeostasis
  • pancreas development
  • elevation of cytosolic calcium ion concentration

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum membrane
  • endoplasmic reticulum

Molecular Function

What the gene product does at the molecular level
  • selenium binding
  • thioredoxin-disulfide reductase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.