Rprd1a Gene Summary [Rat]

This gene encodes a cell-cycle and transcription regulatory protein. The encoded protein interacts with the cell cycle inhibitor cyclin-dependent kinase 4 inhibitor B and may function as a negative regulator of G(1)/S phase progression. This protein also forms homo- and hetrodimers with the protein, regulation of nuclear pre-mRNA domain-containing protein 1B, to form a scaffold that interacts with the C-terminal domain of RNA polymerase II subunit B1 and regulates several aspects of transcription. Alternate splicing results in multiple transcript variants. A pseudogene of this gene is found on chromosome 16. [provided by RefSeq, Dec 2014]

Details

Type
Protein Coding
Official Symbol
Rprd1a
Official Name
regulation of nuclear pre-mRNA domain containing 1A [Source:RGD Symbol;Acc:1307374]
Ensembl ID
ENSRNOG00000016036
Bio databases IDs NCBI: 291736 Ensembl: ENSRNOG00000016036
Aliases regulation of nuclear pre-mRNA domain containing 1A
Synonyms BC021395, C77387, HsT3101, LOC105372067, mKIAA4077, P15RS, regulation of nuclear pre-mRNA domain containing 1A, RGD1307374
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Rprd1a often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • VHS, ENTH and ANTH domain superfamily
  • CID domain
  • protein binding
  • Cell-cycle alteration and expression-elevated protein in tumour
  • identical protein binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • tuberculosis
regulated by
regulates
role in cell
  • growth
  • migration
  • colony formation by
  • invasion

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space
  • Nucleus
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Rprd1a gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • promoter clearance from RNA polymerase II promoter
  • mRNA 3'-end processing

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • RNA polymerase II core binding

Gene-Specific Assays for Results You Can Trust

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