Snrnp27 Gene Summary [Rat]

This gene encodes a nuclear envelope protein that contains a broad-complex, tramtrack and bric a brac/ Pox virus and Zinc finger (BTB/POZ) protein-protein interaction domain. In mouse, this gene is expressed at high levels in the testis, and null mutant mice exhibit morphologically abnormal sperm that have chromatin condensation defects. These defects result in significantly impaired fertility, demonstrating a role for this gene in male germ cell development in mouse. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2015]

Details

Type
Protein Coding
Official Symbol
Snrnp27
Official Name
small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:RGD Symbol;Acc:1310925]
Ensembl ID
ENSRNOG00000017838
Bio databases IDs NCBI: 362392 NCBI: 312516 Ensembl: ENSRNOG00000017838
Aliases small nuclear ribonucleoprotein U4/U6.U5 subunit 27
Synonyms 2610209M04Rik, 27K, RGD1310925, RY1, small nuclear ribonucleoprotein 27 (U4/U6.U5), small nuclear ribonucleoprotein U4/U6.U5 subunit 27
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Snrnp27 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • U4/U6.U5 small nuclear ribonucleoproteins
  • protein binding

Pathways

Biological processes and signaling networks where the Snrnp27 gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • flu
regulated by
role in cell
  • homologous recombination in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • spliceosomes
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Snrnp27 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • nuclear mRNA splicing, via spliceosome

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • U4/U6 x U5 tri-snRNP complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • nucleic acid binding
  • protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.