Gypc Gene Summary [Rat]

Glycophorin C (GYPC) is an integral membrane glycoprotein. It is a minor species carried by human erythrocytes, but plays an important role in regulating the mechanical stability of red cells. A number of glycophorin C mutations have been described. The Gerbich and Yus phenotypes are due to deletion of exon 3 and 2, respectively. The Webb and Duch antigens, also known as glycophorin D, result from single point mutations of the glycophorin C gene. The glycophorin C protein has very little homology with glycophorins A and B. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Feb 2012]

Details

Type
Protein Coding
Official Symbol
Gypc
Official Name
glycophorin C (Gerbich blood group) [Source:RGD Symbol;Acc:1310295]
Ensembl ID
ENSRNOG00000029939
Bio databases IDs NCBI: 364837 Ensembl: ENSRNOG00000029939
Aliases glycophorin C (Gerbich blood group)
Synonyms 0610037F22RIK, CD236, CD236R, GE, glycophorin C, glycophorin C (Gerbich blood group), GPC, GPD, GYPD, PAS-2, PAS-2'
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Gypc often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • putative band 4.1 homologues' binding motif
  • cytoplasmic domain
  • protein binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • psoriatic arthritis
  • lung squamous cell carcinoma
  • colon adenocarcinoma
  • squamous cell lung cancer
  • lung adenocarcinoma
  • urothelial bladder carcinoma
  • rectum cancer
  • atrial fibrillation
  • colon epithelial cancer
  • colorectal carcinomagenesis
regulated by
  • Ca2+
  • thioguanine nucleotide
  • urea
  • dexamethasone
  • KLF13
  • PKC
  • peripheral blood natural killer cells
  • EPB41
  • 2,3-diphosphoglycerate
  • oxygen

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cortical cytoskeleton
  • cell surface
  • cellular membrane
  • Nucleus

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Gypc gene, providing context for its role in the cell.

Cellular Component

Where in the cell the gene product is active
  • membrane
  • plasma membrane
  • cortical cytoskeleton

Molecular Function

What the gene product does at the molecular level
  • protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.