HNRNPD

HNRNPD Gene Summary

This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are nucleic acid binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has two repeats of quasi-RRM domains that bind to RNAs. It localizes to both the nucleus and the cytoplasm. This protein is implicated in the regulation of mRNA stability. Alternative splicing of this gene results in four transcript variants. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
HNRNPD
Official Name
heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
Ensembl ID
ENSG00000138668
Bio databases IDs NCBI: 3184 Ensembl: ENSG00000138668
Aliases heterogeneous nuclear ribonucleoprotein D
Synonyms
AUF1,AUF1A,C230004L04,heterogeneous nuclear ribonucleoprotein D,hnRNP C like,hnRNPD0,HnRNP UP2,HNRPD
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA recognition motif (RRM) superfamily
  • transcription regulator
  • mRNA 3' UTR binding
  • RNA recognition motif
  • mRNA binding
  • histone deacetylase binding
  • chromatin binding
  • protein binding
  • telomeric DNA binding
  • RNA-binding domain
  • RNA binding
  • AT DNA binding

Pathways

Biological processes and signaling networks where the HNRNPD gene plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • MDM2
  • ERBB3
  • RRM2
  • H4C1
  • MAP3K4
  • BEND3
  • STRBP
  • TIAL1
  • KHDRBS2
  • UBE2A
disease
  • neoplasia
  • plexiform neurofibroma
  • glioblastoma
  • pancreatic cancer
  • growth failure
  • glioblastoma cancer
  • tumorigenesis
  • bleeding
  • neurodevelopmental disorder
  • infection by bacteria
regulated by
  • beta-estradiol
  • EGFR
  • glutamine
  • tetradecanoylphorbol acetate
  • VPR
  • KRAS
  • tretinoin
  • HNRNPD
  • ELAVL1
  • LARP1B
regulates
  • IL6
  • IL10
  • TNF
  • blood urea nitrogen
  • TERT
  • BCL2L1
  • LDLR
  • AKT
  • ACTA2
  • TGFB1
role in cell
  • expression in
  • degradation in
  • growth
  • phosphorylation in
  • activation in
  • activation
  • function
  • senescence
  • response by
  • nuclear import in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • glutaminergic synapse
  • Cytoplasm
  • ribosome
  • polysomes
  • cytoplasmic aggregates
  • cytosol
  • nucleoplasm
  • nucleoli
  • interchromatin granule clusters
  • nuclear speckles
  • synapse
  • chromatin
  • postsynaptic density
  • cytoplasmic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the HNRNPD gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • 3'-UTR-mediated mRNA destabilization
  • positive regulation of translation
  • negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
  • cerebellum development
  • regulation of transcription, DNA-dependent
  • RNA processing
  • regulation of circadian rhythm
  • RNA catabolic process
  • negative regulation of gene expression
  • cellular response to amino acid stimulus
  • cellular response to estradiol stimulus
  • circadian regulation of translation
  • positive regulation of cytoplasmic translation
  • positive regulation of transcription, DNA-dependent
  • liver development
  • response to calcium ion
  • cellular response to nitric oxide
  • regulation of gene expression
  • response to electrical stimulus
  • CRD-mediated mRNA stabilization
  • regulation of telomere maintenance

CELLULAR COMPONENT

Where in the cell the gene product is active
  • nucleus
  • postsynaptic density
  • cytosol
  • chromatin
  • nucleoplasm

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • protein binding
  • RNA binding
  • histone deacetylase binding
  • mRNA 3'-UTR AU-rich region binding
  • telomeric DNA binding
  • AT DNA binding
  • chromatin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.