ATP2B3 Gene Summary [Human]

The protein encoded by this gene belongs to the family of P-type primary ion transport ATPases characterized by the formation of an aspartyl phosphate intermediate during the reaction cycle. These enzymes remove bivalent calcium ions from eukaryotic cells against very large concentration gradients and play a critical role in intracellular calcium homeostasis. The mammalian plasma membrane calcium ATPase isoforms are encoded by at least four separate genes and the diversity of these enzymes is further increased by alternative splicing of transcripts. The expression of different isoforms and splice variants is regulated in a developmental, tissue- and cell type-specific manner, suggesting that these pumps are functionally adapted to the physiological needs of particular cells and tissues. This gene encodes the plasma membrane calcium ATPase isoform 3. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
ATP2B3
Official Name
ATPase plasma membrane Ca2+ transporting 3 [Source:HGNC Symbol;Acc:HGNC:816]
Ensembl ID
ENSG00000067842
Bio databases IDs NCBI: 492 Ensembl: ENSG00000067842
Aliases ATPase plasma membrane Ca2+ transporting 3, plasma membrane calcium-transporting ATPase 3, cilia and flagella associated protein 39
Synonyms 6430519O13Rik, ATPase, Ca++ transporting, plasma membrane 3, ATPase plasma membrane Ca2+ transporting 3, CFAP39, CLA2, OPCA, PMCA3, SCAX1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ATP2B3 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • phosphoglycolate phosphatase, TA0175-type
  • Cation transporter/ATPase, N-terminus
  • regulatory domain
  • sarco/endoplasmic reticulum calcium-translocating P-type ATPase
  • heavy metal translocating P-type ATPase
  • E1-E2 ATPase
  • copper-(or silver)-translocating P-type ATPase
  • plasma-membrane calcium-translocating P-type ATPase
  • phospholipid-translocating P-type ATPase, flippase
  • Na,H/K antiporter P-type ATPase alpha subunit
  • potassium and/or sodium efflux P-type ATPase, fungal-type
  • Cation transport ATPase (P-type)
  • Cation transporting ATPase, C-terminus
  • Ca2+-transporting ATPase
  • calcium ion transporter
  • heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
  • calmodulin binding domain
  • protein binding
  • P-type ATPase of unknown pump specificity (type V)
  • ATPase, P-type (transporting), HAD superfamily, subfamily IC
  • Plasma membrane calcium transporter ATPase C terminal
  • PDZ-domain binding
  • K+-transporting ATPase, B subunit
  • Haloacid Dehalogenase-like Hydrolases
  • transporter

Pathways

Biological processes and signaling networks where the ATP2B3 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • preeclampsia
  • X-linked spinocerebellar ataxia type 1
  • hereditary disorder
  • adenoma formation
  • epithelial neoplasia
  • benign neoplasia
  • aldosterone producing adrenocortical adenoma
  • hereditary spastic ataxia
  • X-linked congenital cerebellar ataxia
  • developmental delay and generalized hypotonia and cerebellar ataxia
regulated by
regulates
role in cell
  • expression in
  • production in
  • homeostasis in
  • depolarization

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • plasma membrane fraction
  • glutaminergic synapse
  • cellular membrane
  • Nucleus
  • actin bundles
  • apical membrane
  • presynaptic membrane
  • basolateral membrane
  • synapse
  • cuticular plate
  • excitatory synapses
  • parallel fiber

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human ATP2B3 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • ion transmembrane transport
  • cytosolic calcium ion homeostasis

Cellular Component

Where in the cell the gene product is active
  • presynaptic membrane
  • intracellular membrane-bounded organelle
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • ATPase activity
  • ATP binding
  • calmodulin binding
  • protein binding
  • metal ion binding
  • PDZ domain binding
  • calcium ion transmembrane transporter activity
  • calcium-transporting ATPase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.