COPA Gene Summary [Human]

In eukaryotic cells, protein transport between the endoplasmic reticulum and Golgi compartments is mediated in part by non-clathrin-coated vesicular coat proteins (COPs). Seven coat proteins have been identified, and they represent subunits of a complex known as coatomer. The subunits are designated alpha-COP, beta-COP, beta-prime-COP, gamma-COP, delta-COP, epsilon-COP, and zeta-COP. The alpha-COP, encoded by COPA, shares high sequence similarity with RET1P, the alpha subunit of the coatomer complex in yeast. Also, the N-terminal 25 amino acids of alpha-COP encode the bioactive peptide, xenin, which stimulates exocrine pancreatic secretion and may act as a gastrointestinal hormone. Alternative splicing results in multiple splice forms encoding distinct isoforms. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
COPA
Official Name
COPI coat complex subunit alpha [Source:HGNC Symbol;Acc:HGNC:2230]
Ensembl ID
ENSG00000122218
Bio databases IDs NCBI: 1314 Ensembl: ENSG00000122218
Aliases COPI coat complex subunit alpha, proxenin, xenin
Synonyms AIAISD, AILJK, Alpha-coat, Alpha-COP, coatomer protein complex subunit alpha, coatomer protein complex subunit α, COPI coat complex subunit alpha, COPI coat complex subunit α, HEP-COP, xenin, α-coat, α-COP
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human COPA often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Coatomer (COPI) alpha subunit C-terminus
  • WD40 repeats
  • mRNA binding
  • WD domain, G-beta repeat
  • WD40
  • protein binding
  • Coatomer WD associated region
  • transporter

Pathways

Biological processes and signaling networks where the COPA gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • autoimmune interstitial lung, joint and kidney disease
  • HER2 negative hormone receptor negative breast cancer
  • Hutchinson-Gilford progeria syndrome
  • infection by Human parainfluenza virus 3
  • infection by vesicular stomatitis virus
  • infection by lymphocytic choriomeningitis virus
regulated by
  • dexamethasone
  • insulin
  • ESR1
  • SOD1
  • MYB family
  • SH-SY5Y cells
  • AKT1
  • decitabine
  • OSW-1
  • CLN8
regulates
role in cell
  • cell viability
  • expression in
  • production in
  • apoptosis
  • frequency
  • cell death
  • accumulation in
  • phosphorylation in
  • binding in
  • activation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • membrane fraction
  • Extracellular Space
  • Golgi Apparatus
  • cytosol
  • endoplasmic reticulum membrane
  • Golgi membrane
  • growth cone
  • transport vesicles
  • perikaryon
  • axons

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human COPA gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • ER to Golgi vesicle-mediated transport
  • signal transduction
  • retrograde vesicle-mediated transport, Golgi to ER
  • intra-Golgi vesicle-mediated transport
  • intracellular protein transport
  • pancreatic juice secretion

Cellular Component

Where in the cell the gene product is active
  • growth cone
  • endoplasmic reticulum membrane
  • extracellular space
  • extracellular vesicular exosome
  • cytoplasm
  • membrane
  • cytosol
  • Golgi membrane
  • transport vesicle
  • COPI vesicle coat

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • structural molecule activity
  • hormone activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.