OGFOD1 Gene Summary [Human]

Enables peptidyl-proline 3-dioxygenase activity. Involved in several processes, including peptidyl-proline hydroxylation; regulation of translational termination; and stress granule assembly. Located in cytoplasmic stress granule; cytosol; and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]

Details

Type
Nonsense Mediated Decay
Official Symbol
OGFOD1
Official Name
2-oxoglutarate and iron dependent oxygenase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25585]
Ensembl ID
ENSG00000087263
Bio databases IDs NCBI: 55239 Ensembl: ENSG00000087263
Aliases 2-oxoglutarate and iron dependent oxygenase domain containing 1, TPA1, termination and polyadenylation 1, homolog (S. cerevisiae)
Synonyms 2-oxoglutarate and iron-dependent oxygenase domain containing 1, 4930415J21Rik, mKIAA1612, RGD1308848, TPA1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human OGFOD1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • 2-oxoglutarate:oxygen oxidoreductase
  • enzyme
  • protein binding
  • 2OG-Fe(II) oxygenase superfamily
  • Prolyl 4-hydroxylase alpha subunit homologues

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • diabetic nephropathy
regulated by
regulates
role in cell
  • apoptosis
  • proliferation
  • accumulation
  • assembly
  • phosphorylation in
  • serine phosphorylation in
  • accumulation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • Nucleus
  • cytosol
  • nucleoplasm
  • stress granule

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human OGFOD1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cell proliferation
  • stress granule assembly
  • regulation of translational termination
  • peptidyl-proline hydroxylation
  • protein hydroxylation

Cellular Component

Where in the cell the gene product is active
  • cytoplasmic stress granule
  • cytoplasm
  • cytosol
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • L-ascorbic acid binding
  • protein binding
  • iron ion binding
  • peptidyl-proline dioxygenase activity
  • peptidyl-proline 3-dioxygenase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.