GTF3C5 Gene Summary [Human]

Predicted to contribute to DNA binding activity. Predicted to be involved in 5S class rRNA transcription by RNA polymerase III and tRNA transcription by RNA polymerase III. Predicted to act upstream of or within skeletal muscle cell differentiation. Located in nucleoplasm. Part of transcription factor TFIIIC complex. [provided by Alliance of Genome Resources, Apr 2022]

Details

Type
Protein Coding
Official Symbol
GTF3C5
Official Name
general transcription factor IIIC subunit 5 [Source:HGNC Symbol;Acc:HGNC:4668]
Ensembl ID
ENSG00000148308
Bio databases IDs NCBI: 9328 Ensembl: ENSG00000148308
Aliases general transcription factor IIIC subunit 5, transcription factor IIIC, 63 kD
Synonyms 2700084A09RIK, general transcription factor IIIC, polypeptide 5, general transcription factor IIIC subunit 5, HLH Transcription Factor 4, TFiiiC2-63, TFIIIC63, TFIIICepsilon
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human GTF3C5 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA polymerase III transcription factor (TF)IIIC subunit HTH domain
  • transcription regulator
  • Tau95 Triple barrel domain
  • protein binding

Pathways

Biological processes and signaling networks where the GTF3C5 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • autosomal dominant thrombocytopenia type 4
  • hemorrhagic disease
regulated by
  • MYC
  • COPS5
  • N,N,N',N'-tetrakis(2-pyridyl-methyl)ethylenediamine
  • 2-amino-5-phosphonovaleric acid
role in cell
  • differentiation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human GTF3C5 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • transcription from RNA polymerase III promoter
  • skeletal muscle cell differentiation
  • transcription initiation from RNA polymerase III promoter
  • 5S class rRNA transcription from RNA polymerase III type 1 promoter
  • tRNA transcription from RNA polymerase III promoter

Cellular Component

Where in the cell the gene product is active
  • transcription factor TFIIIC complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • RNA polymerase III type 1 promoter sequence-specific DNA binding
  • DNA binding
  • protein binding
  • core RNA polymerase III binding transcription factor activity
  • RNA polymerase III type 2 promoter sequence-specific DNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.