NRXN1 Gene Summary [Human]

This gene encodes a single-pass type I membrane protein that belongs to the neurexin family. Neurexins are cell-surface receptors that bind neuroligins to form Ca(2+)-dependent neurexin/neuroligin complexes at synapses in the central nervous system. This complex is required for efficient neurotransmission and is involved in the formation of synaptic contacts. Three members of this gene family have been studied in detail and are estimated to generate over 3,000 variants through the use of two alternative promoters (alpha and beta) and extensive alternative splicing in each family member. Recently, a third promoter (gamma) was identified for this gene in the 3' region. Mutations in this gene are associated with Pitt-Hopkins-like syndrome-2 and may contribute to susceptibility to schizophrenia. [provided by RefSeq, Aug 2016]

Details

Type
Protein Coding
Official Symbol
NRXN1
Official Name
neurexin 1 [Source:HGNC Symbol;Acc:HGNC:8008]
Ensembl ID
ENSG00000179915
Bio databases IDs NCBI: 9378 Ensembl: ENSG00000179915
Aliases neurexin 1
Synonyms 1700062G21Rik, 9330127H16Rik, A230068P09Rik, Hs.22998, LOC103692560, mKIAA0578, neurexin 1, Neurexin-1 alpha, Neurexin-1 α, Neurexin 1 β, neurexin I, Nrxn1a, Nrxn1b, PTHSL2, SCZD17, WRXN
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human NRXN1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • calcium-dependent protein binding
  • extracellular domain
  • signaling receptor activity
  • LNS repeats
  • LamG
  • cell adhesion molecule binding
  • ectodomain
  • calcium ion binding
  • Heparan sulfate attachment site
  • protein binding
  • receptor binding
  • EGF-like domain
  • calcium channel regulator
  • EGF_CA
  • Concanavalin A-like lectin/glucanases superfamily
  • type 1 fibroblast growth factor receptor binding
  • putative band 4.1 homologues' binding motif
  • binding protein
  • cytoplasmic domain
  • cytosolic tail domain
  • transmembrane receptor
  • laminin G domain

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • colorectal cancer
  • metabolic syndrome X
  • schizophrenia type 17
  • insomnia
  • cervical carcinoma
  • epithelial uterine cancer
  • cervical cancer
  • Pitt-Hopkins-like syndrome 2
  • drug dependence
  • pervasive developmental disorder
regulated by
  • topotecan
  • K+
  • D-glucose
  • NLGN1
  • tazemetostat
  • trichostatin A
  • SP2509
  • decitabine
  • CHD4
  • MDGA1
regulates
role in cell
  • expression in
  • formation
  • assembly
  • binding in
  • adhesion
  • differentiation
  • cell-cell adhesion
  • docking
  • response by
  • docking in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • glutaminergic synapse
  • axon component
  • cell surface
  • cellular membrane
  • vesicles
  • Endoplasmic Reticulum
  • intercellular junctions
  • presynaptic membrane
  • nucleoli
  • nuclear envelope
  • synaptic vesicles
  • growth cone
  • nerve ending
  • synapse
  • endocytotic vesicle
  • perikaryon
  • axons

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human NRXN1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • heterophilic cell-cell adhesion
  • vocal learning
  • neuron cell-cell adhesion
  • positive regulation of fibroblast growth factor receptor signaling pathway
  • synaptic vesicle clustering
  • axon guidance
  • negative regulation of filopodium assembly
  • learning
  • positive regulation of protein kinase A signaling cascade
  • cellular response to calcium ion
  • postsynaptic membrane assembly
  • angiogenesis
  • neuronal signal transduction
  • presynaptic membrane assembly
  • regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity
  • regulation of N-methyl-D-aspartate selective glutamate receptor activity
  • positive regulation of synaptic transmission, glutamatergic
  • protein localization to synapse
  • positive regulation of synapse assembly
  • positive regulation of peptidyl-serine phosphorylation
  • social behavior
  • positive regulation of synapse maturation
  • cerebellar granule cell differentiation
  • protein complex assembly involved in synapse maturation
  • calcium-dependent cell-cell adhesion
  • neuron projection development
  • positive regulation of protein kinase C activity
  • signal transduction
  • synaptic transmission
  • neurotransmitter secretion
  • receptor localization to synapse
  • establishment of protein localization
  • negative regulation of gene expression
  • synapse assembly
  • gamma-aminobutyric acid receptor clustering
  • N-methyl-D-aspartate receptor clustering
  • positive regulation of gene expression
  • guanylate kinase-associated protein clustering
  • positive regulation of ERK1 and ERK2 cascade
  • gephyrin clustering
  • postsynaptic density protein 95 clustering
  • neuroligin clustering
  • positive regulation of excitatory postsynaptic membrane potential
  • adult behavior
  • neuromuscular process controlling balance
  • positive regulation of protein kinase B signaling cascade
  • vocalization behavior

Cellular Component

Where in the cell the gene product is active
  • presynaptic membrane
  • endocytic vesicle
  • nuclear membrane
  • axonal growth cone
  • vesicle
  • endoplasmic reticulum
  • neuronal cell body
  • nucleolus
  • cell projection
  • plasma membrane
  • cell surface

Molecular Function

What the gene product does at the molecular level
  • acetylcholine receptor binding
  • cell adhesion molecule binding
  • signaling receptor activity
  • calcium-dependent protein binding
  • calcium channel regulator activity
  • receptor binding
  • type 1 fibroblast growth factor receptor binding
  • transmembrane signaling receptor activity
  • protein binding
  • metal ion binding
  • calcium ion binding
  • neuroligin family protein binding

Gene-Specific Assays for Results You Can Trust

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