CERKL Gene Summary [Human]

This gene was initially identified as a locus (RP26) associated with an autosomal recessive form of retinitis pigmentosa (arRP) disease. This gene encodes a protein with ceramide kinase-like domains, however, the protein does not phosphorylate ceramide and its target substrate is currently unknown. This protein may be a negative regulator of apoptosis in photoreceptor cells. Mutations in this gene cause a form of retinitis pigmentosa characterized by autosomal recessive cone and rod dystrophy (arCRD). Alternative splicing of this gene results in multiple transcript variants encoding different isoforms and non-coding transcripts.[provided by RefSeq, May 2010]

Details

Type
Protein Coding
Official Symbol
CERKL
Official Name
ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
Ensembl ID
ENSG00000188452
Bio databases IDs NCBI: 375298 Ensembl: ENSG00000188452
Aliases ceramide kinase like
Synonyms ceramide kinase-like, CERK like autophagy regulator, Gm1958, RGD1561057, RP26
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human CERKL often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Ceramide kinase C-terminal domain
  • sphingolipid binding
  • Diacylglycerol kinase catalytic domain
  • protein binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • retinitis pigmentosa type 26
  • fundus flavimaculatus
  • retinitis pigmentosa
  • retinal dystrophy
  • autosomal recessive retinitis pigmentosa
  • cone-rod dystrophy
  • COVID-19
  • covid-19 death
  • macular degeneration
  • peptic ulcer disease
regulates
  • glutathione
  • reactive oxygen species
  • sphingolipid
role in cell
  • apoptosis
  • number
  • ferroptosis
  • shape change
  • mitochondrial respiration in
  • shape change in
  • necroptosis
  • shortening in
  • shortening
  • degeneration

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Cytoplasm
  • perinuclear region
  • Golgi Apparatus
  • Endoplasmic Reticulum
  • Mitochondria
  • cytosol
  • nucleoplasm
  • nucleoli
  • photoreceptor outer segments
  • photoreceptor inner segments

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human CERKL gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • phosphorylation
  • sphingolipid biosynthetic process
  • sphingolipid metabolic process

Cellular Component

Where in the cell the gene product is active
  • perinuclear region of cytoplasm
  • cytosol
  • endoplasmic reticulum
  • Golgi apparatus
  • nucleolus
  • photoreceptor inner segment
  • photoreceptor outer segment
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • lipid kinase activity
  • sphingolipid binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.