EXOSC6 Gene Summary [Human]

This gene product constitutes one of the subunits of the multisubunit particle called exosome, which mediates mRNA degradation. The composition of human exosome is similar to its yeast counterpart. This protein is homologous to the yeast Mtr3 protein. Its exact function is not known, however, it has been shown using a cell-free RNA decay system that the exosome is required for rapid degradation of unstable mRNAs containing AU-rich elements (AREs), but not for poly(A) shortening. The exosome does not recognize ARE-containing mRNAs on its own, but requires ARE-binding proteins that could interact with the exosome and recruit it to unstable mRNAs, thereby promoting their rapid degradation. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
EXOSC6
Official Name
exosome component 6 [Source:HGNC Symbol;Acc:HGNC:19055]
Ensembl ID
ENSG00000223496
Bio databases IDs NCBI: 118460 Ensembl: ENSG00000223496
Aliases exosome component 6, Mtr3 (mRNA transport regulator 3)-homolog (yeast)
Synonyms 2610510N21Rik, C76919, EAP4, exosome component 6, hMtr3p, MTR3, Mtr3p, p11
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human EXOSC6 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNase PH-like 3'-5' exoribonucleases
  • archaeal exosome-like complex exonuclease 1
  • 3' exoribonuclease family, domain 1

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neuropathic pain
regulated by
role in cell
  • processing in
  • class switching

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • cytosol
  • nucleoplasm
  • nucleoli
  • exosomes

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human EXOSC6 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • polyadenylation-dependent snoRNA 3'-end processing
  • U4 snRNA 3'-end processing
  • rRNA catabolic process
  • nuclear-transcribed mRNA catabolic process
  • positive regulation of isotype switching
  • nuclear mRNA surveillance
  • DNA deamination
  • RNA processing
  • rRNA processing
  • isotype switching
  • RNA catabolic process

Cellular Component

Where in the cell the gene product is active
  • cytoplasmic exosome (RNase complex)
  • nucleus
  • nuclear exosome (RNase complex)
  • cytosol
  • nucleolus
  • exosome (RNase complex)
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • RNA binding
  • exoribonuclease activity

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