Nufip1 Gene Summary [Mouse]

Enables RNA binding activity. Predicted to be involved in box C/D snoRNP assembly and positive regulation of transcription by RNA polymerase II. Located in nucleus. Is active in synapse. Is expressed in early conceptus; inner cell mass; oocyte; and trophectoderm. Orthologous to human NUFIP1 (nuclear FMR1 interacting protein 1). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Nufip1
Official Name
nuclear fragile X mental retardation protein interacting protein 1 [Source:MGI Symbol;Acc:MGI:1351474]
Ensembl ID
ENSMUSG00000022009
Bio databases IDs NCBI: 27275 Ensembl: ENSMUSG00000022009
Aliases nuclear fragile X mental retardation protein interacting protein 1
Synonyms bA540M5.1, nuclear FMR1 interacting protein 1, NUFIP, Rsa1
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Nufip1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • ATPase binding
  • Zinc-finger double-stranded RNA-binding
  • pep motif
  • protein binding activity, bridging
  • Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1)
  • snoRNA binding
  • protein binding
  • zinc finger domain
  • identical protein binding
  • RNA binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • colon cancer
  • cancer cachexia
regulated by
  • Caco2 cells
  • chloroquine
  • HeLa cells
  • RAC1
  • TCF4
regulates
  • DNA endogenous promoter
  • DNA promoter
  • RNA polymerase II

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • polyribosome fractions
  • fibrillar center
  • nuclear chromatin
  • nuclear foci
  • nucleoplasm
  • nucleoli
  • nuclear matrix
  • synapse

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Nufip1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • box C/D snoRNP assembly
  • RNA processing
  • positive regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • transcription elongation factor complex
  • presynaptic active zone
  • perichromatin fibrils
  • pre-snoRNP complex
  • nuclear matrix
  • macromolecular complex
  • nucleolus
  • fibrillar center
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • identical protein binding
  • snoRNA binding
  • RNA binding
  • protein binding
  • metal ion binding
  • protein binding, bridging
  • ATPase binding

Gene-Specific Assays for Results You Can Trust

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