Cldn18 Gene Summary [Mouse]

This gene encodes a member of the claudin family. Claudins are integral membrane proteins and components of tight junction strands. Tight junction strands serve as a physical barrier to prevent solutes and water from passing freely through the paracellular space between epithelial or endothelial cell sheets, and also play critical roles in maintaining cell polarity and signal transductions. This gene is a downstream target gene regulated by the T/EBP/NKX2.1 homeodomain transcription factor. Four alternatively spliced transcript variants resulted from alternative promoters and alternative splicing have been identified, which encode two lung-specific isoforms and two stomach-specific isoforms respectively. This gene is also expressed in colons, inner ear and skin, and its expression is increased in both experimental colitis and ulcerative colitis. [provided by RefSeq, Aug 2010]

Details

Type
Protein Coding
Official Symbol
Cldn18
Official Name
claudin 18 [Source:MGI Symbol;Acc:MGI:1929209]
Ensembl ID
ENSMUSG00000032473
Bio databases IDs NCBI: 56492 Ensembl: ENSMUSG00000032473
Aliases claudin 18
Synonyms Claudin 18, DKFZP564B2062, LOC100366183, SFTA5, SFTPJ
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Cldn18 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • PMP-22/EMP/MP20/Claudin family
  • extracellular loop
  • protein binding
  • identical protein binding

Pathways

Biological processes and signaling networks where the Cldn18 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • lung cancer
  • epithelial cancer
  • gastroesophageal junction adenocarcinoma
  • metastatic gastric adenocarcinoma
  • colorectal cancer
  • gastric adenocarcinoma
  • gastric epithelial cancer
  • colon adenocarcinoma
  • colon epithelial cancer
  • metastatic gastroesophageal junction adenocarcinoma
regulated by
regulates
  • mineral
role in cell
  • proliferation
  • number
  • differentiation
  • assembly
  • organization
  • abnormal morphology

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • Cytoplasm
  • cellular membrane
  • intercellular junctions
  • tight junctions

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Cldn18 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • calcium-independent cell-cell adhesion
  • organ growth
  • negative regulation of protein localization to nucleus
  • epithelial fluid transport
  • cell adhesion
  • negative regulation of bone resorption
  • cellular response to estrogen stimulus
  • lung alveolus development
  • response to ethanol
  • epithelial cell proliferation
  • digestive tract development
  • negative regulation of tumor necrosis factor-mediated signaling pathway
  • tight junction assembly
  • negative regulation of osteoclast development
  • protein localization to nucleus

Cellular Component

Where in the cell the gene product is active
  • tight junction
  • lateral plasma membrane
  • cell-cell junction
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • identical protein binding
  • protein binding
  • structural molecule activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.