Rps27a Gene Summary [Rat]

The protein encoded by this gene is a fusion protein that contains ubiquitin at its N-terminus and ribosomal protein S27a at its C-terminus. When the human ortholog of this protein is expressed in yeast, it is processed post-translationally into two products, a free ubiquitin monomer and ribosomal protein S27a, a component of the 40S ribosomal subunit. There are multiple pseudogenes of this gene. There is a locus on chromosome 5 (GeneID:81777) that contains an intact copy of the open reading frame of this gene, that is likely to be the result of retrotransposition of an mRNA into the genome. The transcriptional status of this locus cannot be verified at the present time. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2015]

Details

Type
Protein Coding
Official Symbol
Rps27a
Official Name
ribosomal protein S27a [Source:RGD Symbol;Acc:6489478]
Ensembl ID
ENSRNOG00000004426
Bio databases IDs NCBI: 100912032 Ensembl: ENSRNOG00000004426
Aliases ribosomal protein S27a
Synonyms 0610006J14Rik, CEP80, eS31, HEL112, ribosomal protein S27A, S27A, Uba52, UBA80, Ubb, UBC, UBCEP1, UBCEP80
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Rps27a often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Ubiquitin family
  • structural constituent of ribosome
  • Ubl1_cv_Nsp3_N-like
  • Ribosomal protein S27a
  • Ubiquitin homologues
  • protein binding

Pathways

Biological processes and signaling networks where the Rps27a gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • organismal death
  • non-small cell lung cancer
  • myelodysplastic syndrome
  • lung adenocarcinoma
  • lung adenocarcinoma formation
  • non-small cell lung carcinoma
regulated by
  • cannabinol
  • palmitic acid
  • CTNNB1
  • TNF
  • MKKS
  • metribolone
  • Immunoglobulin
  • ST1926
  • torin1
  • sirolimus
regulates
role in cell
  • cell viability
  • apoptosis
  • binding in
  • cell death
  • replication in
  • G1 phase
  • ubiquitination in
  • processing in
  • nuclear export in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • detergent resistant lipid raft fraction
  • endocytic vesicle membrane
  • pre-ribosome
  • ribosome
  • Nucleus
  • Plasma Membrane
  • Endoplasmic Reticulum
  • cytosol
  • endoplasmic reticulum membrane
  • mitochondrial outer membrane
  • endosomal membrane
  • nucleoplasm
  • nucleoli
  • synapse
  • phagosomes

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Rps27a gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cytoplasmic translation
  • modification-dependent protein catabolic process
  • protein ubiquitination
  • translation

Cellular Component

Where in the cell the gene product is active
  • small-subunit processome
  • cytosolic ribosome
  • cytosolic small ribosomal subunit
  • synapse
  • mitochondrial outer membrane
  • nucleolus
  • plasma membrane
  • nucleoplasm
  • endoplasmic reticulum membrane
  • nucleus
  • extracellular space
  • extracellular vesicular exosome
  • cytoplasm
  • membrane
  • vesicle
  • cytosol
  • endosome membrane
  • endocytic vesicle membrane

Molecular Function

What the gene product does at the molecular level
  • ubiquitin protein ligase binding
  • RNA binding
  • protein binding
  • structural constituent of ribosome
  • metal ion binding
  • protein tag

Gene-Specific Assays for Results You Can Trust

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