S100a13 Gene Summary [Rat]

The protein encoded by this gene is a member of the S100 family of proteins containing 2 EF-hand calcium-binding motifs. S100 proteins are localized in the cytoplasm and/or nucleus of a wide range of cells, and involved in the regulation of a number of cellular processes such as cell cycle progression and differentiation. S100 genes include at least 13 members which are located as a cluster on chromosome 1q21. This protein is widely expressed in various types of tissues with a high expression level in thyroid gland. In smooth muscle cells, this protein co-expresses with other family members in the nucleus and in stress fibers, suggesting diverse functions in signal transduction. Multiple alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
S100a13
Official Name
S100 calcium binding protein A13 [Source:RGD Symbol;Acc:1304919]
Ensembl ID
ENSRNOG00000012393
Bio databases IDs NCBI: 295213 Ensembl: ENSRNOG00000012393
Aliases S100 calcium binding protein A13
Synonyms RP1 178F155, S100A1, S100 calcium binding protein A13
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat S100a13 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • copper ion binding
  • S-100/ICaBP type calcium binding domain
  • fibroblast growth factor binding
  • zinc ion binding
  • calcium ion binding
  • protein homodimerization
  • EFh
  • protein binding
  • receptor binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • organismal death
  • recurrent implantation failure
  • amyotrophic lateral sclerosis
regulated by
  • LMNB1
  • heavy metal
  • vaccinia virus
  • FGF1
  • 1,2-dithiole-3-thione
  • SOX2
  • NFE2L2
  • beta-estradiol
  • SH-SY5Y cells
  • amlexanox
regulates
role in cell
  • proliferation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • Extracellular Space
  • perinuclear region
  • Nucleus
  • Plasma Membrane
  • cytosol
  • nucleoplasm
  • nucleoli

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat S100a13 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • positive regulation of cell proliferation
  • protein transport
  • positive regulation of I-kappaB kinase/NF-kappaB cascade
  • positive regulation of interleukin-1 alpha production
  • mast cell degranulation
  • positive regulation of cytokine production

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • extracellular space
  • perinuclear region of cytoplasm
  • cytoplasm
  • cytosol
  • extracellular region
  • nucleolus
  • plasma membrane
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • zinc ion binding
  • protein homodimerization activity
  • protein binding
  • copper ion binding
  • calcium ion binding
  • calcium-dependent protein binding
  • fibroblast growth factor binding
  • lipid binding
  • RAGE receptor binding

Gene-Specific Assays for Results You Can Trust

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