Khdc4 Gene Summary [Rat]
Predicted to enable RNA binding activity. Predicted to be involved in mRNA splice site recognition. Predicted to be located in cytoplasm and nucleoplasm. Predicted to be part of spliceosomal complex. Predicted to be active in nucleus. Orthologous to human KHDC4 (KH domain containing 4, pre-mRNA splicing factor). [provided by Alliance of Genome Resources, Jul 2025]
Details
| Type | Protein Coding |
| Official Symbol | Khdc4 |
| Official Name | KH domain containing 4, pre-mRNA splicing factor [Source:RGD Symbol;Acc:1565775] |
| Ensembl ID | ENSRNOG00000020139 |
| Bio databases IDs | |
| Aliases | KH domain containing 4, pre-mRNA splicing factor |
| Synonyms | 2810403A07Rik, A430106P18Rik, BLOM7, KH domain containing 4, pre-mRNA splicing factor, KIAA0907, RGD1565775, SNORA80EHG |
| Species | Rat, Rattus norvegicus |
| Orthologies |
Protein Domains
A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Khdc4 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
- K homology (KH) RNA-binding domain, type I
- protein binding
- RNA binding
Top Findings
The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
Subcellular Expression
Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
- Nucleus
- Cytoplasm
- spliceosomes
- nuclear foci
- nucleoplasm
- nuclear speckles
Gene Ontology Annotations
Describes the biological processes, cellular components, and molecular functions associated with the rat Khdc4 gene, providing context for its role in the cell.
Biological Process
Functions and activities the gene product is involved in
- mRNA splice site selection
Cellular Component
Where in the cell the gene product is active
- nucleus
- cytoplasm
- spliceosomal complex
- nucleoplasm
Molecular Function
What the gene product does at the molecular level
- protein binding
- RNA binding