Arf1 Gene Summary [Rat]

ADP-ribosylation factor 1 (ARF1) is a member of the human ARF gene family. The family members encode small guanine nucleotide-binding proteins that stimulate the ADP-ribosyltransferase activity of cholera toxin and play a role in vesicular trafficking as activators of phospholipase D. The gene products, including 6 ARF proteins and 11 ARF-like proteins, constitute a family of the RAS superfamily. The ARF proteins are categorized as class I (ARF1, ARF2 and ARF3), class II (ARF4 and ARF5) and class III (ARF6), and members of each class share a common gene organization. The ARF1 protein is localized to the Golgi apparatus and has a central role in intra-Golgi transport. Multiple alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
Arf1
Official Name
ADP-ribosylation factor 1 [Source:RGD Symbol;Acc:621270]
Ensembl ID
ENSRNOG00000060229
Bio databases IDs NCBI: 64310 Ensembl: ENSRNOG00000060229
Aliases ADP-ribosylation factor 1
Synonyms ARF GTPase 1, PVNH8
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Arf1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • GTP binding domain-switch II region
  • GTPase
  • protein domain specific binding
  • enzyme
  • protein binding
  • magnesium ion binding
  • GTP binding domain-switch I domain
  • phospholipase activator
  • effector domain
  • GTP binding
  • ADP-ribosylation factor family
  • GTPase domain
  • GDP binding
  • myristoylation sequence
  • Ras of Complex, Roc, domain of DAPkinase
  • ADP-ribosylation factor
  • guanine nucleotide exchange factor domain
  • P-loop containing Nucleoside Triphosphate Hydrolases
  • myristoylation signal domain

Pathways

Biological processes and signaling networks where the Arf1 gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • hepatocellular carcinoma
  • liver cancer
  • epithelial cancer
  • periventricular nodular heterotopia type 8
  • endometriosis
  • rheumatoid arthritis
  • adult T-cell leukemia/lymphoma
  • mature T-cell neoplasia
  • T-cell non-Hodgkin disease
regulated by
regulates
role in cell
  • expression in
  • apoptosis
  • shedding in
  • growth
  • maturation
  • phosphorylation in
  • cell viability
  • activation in
  • migration
  • proliferation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • myelin enriched fraction
  • glutaminergic synapse
  • endomembrane system
  • perinuclear region
  • microvesicles
  • membrane surface
  • Plasma Membrane
  • Golgi Apparatus
  • sarcomere
  • cytosol
  • endoplasmic reticulum exit sites
  • Golgi membrane
  • trans Golgi network
  • peroxisome membrane
  • perinucleolar compartments
  • late endosomes
  • cell membrane leading edge
  • postsynaptic density
  • exosomes
  • clathrin-coated vesicles
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Arf1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • vesicle-mediated transport
  • regulation of receptor internalization
  • cellular copper ion homeostasis
  • dendritic spine organization
  • long term synaptic depression
  • intracellular protein transport
  • regulation of Arp2/3 complex-mediated actin nucleation

Cellular Component

Where in the cell the gene product is active
  • postsynaptic density
  • extracellular vesicular exosome
  • focal adhesion
  • cell leading edge
  • cytoplasm
  • cytosol
  • Golgi membrane
  • macromolecular complex
  • neuron projection
  • sarcomere
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • magnesium ion binding
  • GTP binding
  • protein domain specific binding
  • protein binding
  • RNA binding
  • GTPase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.