COL4A1 Gene Summary [Human]

This gene encodes a type IV collagen alpha protein. Type IV collagen proteins are integral components of basement membranes. This gene shares a bidirectional promoter with a paralogous gene on the opposite strand. The protein consists of an amino-terminal 7S domain, a triple-helix forming collagenous domain, and a carboxy-terminal non-collagenous domain. It functions as part of a heterotrimer and interacts with other extracellular matrix components such as perlecans, proteoglycans, and laminins. In addition, proteolytic cleavage of the non-collagenous carboxy-terminal domain results in a biologically active fragment known as arresten, which has anti-angiogenic and tumor suppressor properties. Mutations in this gene cause porencephaly, cerebrovascular disease, and renal and muscular defects. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]

Details

Type
Protein Coding
Official Symbol
COL4A1
Official Name
collagen type IV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2202]
Ensembl ID
ENSG00000187498
Bio databases IDs NCBI: 1282 Ensembl: ENSG00000187498
Aliases collagen type IV alpha 1 chain
Synonyms BRU, BSVD, BSVD1, Col4alpha, Col4α, Col IV, Collagen type iv alpha1, collagen, type IV, alpha 1, collagen type IV alpha 1 chain, collagen, type IV, α 1, collagen type IV α 1 chain, PADMAL, procollagen type 4 alpha 1, procollagen type 4 α 1, RATOR, RAW, SVC, Type iv collagen alpha1 subunit
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human COL4A1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • extracellular matrix structural constituent conferring tensile strength
  • NC1 domain
  • extracellular matrix structural constituent
  • Collagen triple helix repeat (20 copies)
  • C-terminal tandem repeated domain in type 4 procollagen
  • protein binding
  • growth factor binding

Pathways

Biological processes and signaling networks where the COL4A1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • colorectal cancer
  • cardiovascular disorder
  • neoplasia
  • hereditary angiopathy with nephropathy, aneurysms, and muscle cramps
  • porencephaly type 1
  • experimentally-induced diabetes
  • hereditary disorder
  • coronary artery disease
  • pontine autosomal dominant microangiopathy with leukoencephalopathy
  • peripheral arterial disease
regulated by
role in cell
  • expression in
  • migration
  • transmigration
  • organization
  • anoikis
  • development
  • phosphorylation in
  • retention in
  • transdifferentiation
  • retention

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space
  • endoplasmic reticulum lumen
  • extracellular matrix
  • exosomes
  • plasma
  • basement membrane
  • glomerular basement membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human COL4A1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • epithelial cell differentiation
  • neuromuscular junction development
  • cellular response to amino acid stimulus
  • renal tubule morphogenesis
  • patterning of blood vessels
  • extracellular matrix organization
  • basement membrane organization
  • blood vessel morphogenesis
  • collagen-activated tyrosine kinase receptor signaling pathway
  • brain development
  • retinal blood vessel morphogenesis

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum lumen
  • extracellular space
  • basement membrane
  • extracellular region
  • collagen type IV

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • extracellular matrix structural constituent conferring tensile strength
  • extracellular matrix structural constituent
  • platelet-derived growth factor binding

Gene-Specific Assays for Results You Can Trust

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