CDHR5 Gene Summary [Human]

This gene is a novel mucin-like gene that is a member of the cadherin superfamily. While encoding nonpolymorphic tandem repeats rich in proline, serine and threonine similar to mucin proteins, the gene also contains sequence encoding calcium-binding motifs found in all cadherins. The role of the hybrid extracellular region and the specific function of this protein have not yet been determined. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Jan 2010]

Details

Type
Protein Coding
Official Symbol
CDHR5
Official Name
cadherin related family member 5 [Source:HGNC Symbol;Acc:HGNC:7521]
Ensembl ID
ENSG00000099834
Bio databases IDs NCBI: 53841 Ensembl: ENSG00000099834
Aliases cadherin related family member 5
Synonyms 1810074H01Rik, cadherin-related family member 5, MLPCDH, MUCDHL, MU-PCDH
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human CDHR5 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • extracellular domain
  • Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins
  • Cornifin (SPRR) family
  • cytoplasmic domain
  • MAPK-interacting and spindle-stabilising protein-like
  • beta-catenin binding
  • cell adhesion molecule binding
  • calcium ion binding
  • Cadherin repeat-like domain
  • protein binding
  • Spt5 C-terminal nonapeptide repeat binding Spt4

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • colorectal neoplasia
  • gastrointestinal neoplasia
  • epithelial neoplasia
  • benign neoplasia
  • adenoma formation
  • systemic sclerosis
  • survival
  • systemic lupus erythematosus
  • hypothyroidism
regulated by
regulates
role in cell
  • proliferation
  • aggregation
  • activity
  • assembly
  • adhesion

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cell-matrix contacts
  • cellular membrane
  • cell-cell contacts
  • apical membrane
  • microvilli tips
  • brush border
  • clathrin-coated pits
  • microvilli

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human CDHR5 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cell differentiation
  • regulation of microvillus length
  • cell adhesion
  • homophilic cell adhesion

Cellular Component

Where in the cell the gene product is active
  • microvillus membrane
  • brush border membrane
  • extracellular vesicular exosome
  • microvillus
  • coated pit
  • apical plasma membrane
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • calcium ion binding
  • cell adhesion molecule binding
  • beta-catenin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.