PSPC1 Gene Summary [Human]

This gene encodes a nucleolar protein that localizes to punctate subnuclear structures that occur close to splicing speckles, known as paraspeckles. These paraspeckles are composed of RNA-protein structures that include a non-coding RNA, NEAT1/Men epsilon/beta, and the Drosophila Behavior Human Splicing family of proteins, which include the product of this gene and the P54NRB/NONO and PSF/SFPQ proteins. Paraspeckles may function in the control of gene expression via an RNA nuclear retention mechanism. The protein encoded by this gene is found in paraspeckles in transcriptionally active cells, but it localizes to unique cap structures at the nucleolar periphery when RNA polymerase II transcription is inhibited, or during telophase. Alternative splicing of this gene results in multiple transcript variants. A related pseudogene, which is also located on chromosome 13, has been identified. [provided by RefSeq, Aug 2011]

Details

Type
Retained Intron
Official Symbol
PSPC1
Official Name
paraspeckle component 1 [Source:HGNC Symbol;Acc:HGNC:20320]
Ensembl ID
ENSG00000121390
Bio databases IDs NCBI: 55269 Ensembl: ENSG00000121390
Aliases paraspeckle component 1
Synonyms 5730470C09Rik, LOC100912131, paraspeckle component 1, paraspeckle protein 1, PSP1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human PSPC1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA recognition motif (RRM) superfamily
  • transcription regulator
  • eNOPS_SF
  • NOPS (NUC059) domain
  • RNA recognition motif
  • nuclear localization sequence
  • coiled-coil domain
  • protein binding
  • RNA binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • aortic valve calcification
regulated by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • fibrillar center
  • Cytoplasm
  • interchromatin space
  • nucleoplasm
  • nucleoli
  • nuclear bodies
  • nuclear speckles
  • paraspeckle-like structures

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human PSPC1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • rhythmic process
  • negative regulation of transcription, DNA-dependent
  • activation of innate immune response
  • innate immune response
  • regulation of transcription, DNA-dependent
  • regulation of circadian rhythm

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • paraspeckles
  • cytoplasm
  • nuclear speck
  • nuclear matrix
  • fibrillar center
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • RNA binding

Gene-Specific Assays for Results You Can Trust

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