RPA1 Gene Summary [Human]

This gene encodes the largest subunit of the heterotrimeric Replication Protein A (RPA) complex, which binds to single-stranded DNA (ssDNA), forming a nucleoprotein complex that plays an important role in DNA metabolism, being involved in DNA replication, repair, recombination, telomere maintenance, and co-ordinating the cellular response to DNA damage through activation of the ataxia telangiectasia and Rad3-related protein (ATR) kinase. The nucleoprotein complex protects the single-stranded DNA from nucleases, prevents formation of secondary structures that would interfere with repair, and co-ordinates the recruitment and departure of different genome maintenance factors. This subunit contains four oligonucleotide/oligosaccharide-binding (OB) domains, though the majority of ssDNA binding occurs in two of these domains. The heterotrimeric complex has two different modes of ssDNA binding, a low-affinity and high-affinity mode, determined by which ssDNA binding domains are utilized. The different binding modes differ in the length of DNA bound and in the proteins with which it interacts, thereby playing a role in regulating different genomic maintenance pathways. [provided by RefSeq, Sep 2017]

Details

Type
Protein Coding
Official Symbol
RPA1
Official Name
replication protein A1 [Source:HGNC Symbol;Acc:HGNC:10289]
Ensembl ID
ENSG00000132383
Bio databases IDs NCBI: 6117 Ensembl: ENSG00000132383
Aliases replication protein A1
Synonyms 5031405K23Rik, Cb1-727, HSSB, MST075, p70Rpa1, PFBMFT6, REPA1, replication protein A1, RF-A, RP-A, RPA70
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human RPA1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RPA1 DNA binding domain C
  • OB-fold nucleic acid binding domain
  • DNA binding domain
  • protein binding activity, bridging
  • chromatin binding
  • protein binding
  • sequence-specific DNA binding
  • oligonucleotide/oligosaccharide-binding fold of replication protein A and class 2b aminoacyl-tRNA synthetases
  • telomeric DNA binding
  • Replication protein A OB domain
  • Replication factor-A C terminal domain
  • damaged DNA binding
  • single-stranded DNA binding
  • replication factor-a protein 1 (rpa1)
  • E3 ubiquitin ligase domain

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • prostate cancer
  • epithelial cancer
  • B cell cancer
  • prostatic carcinoma
  • lymphomagenesis
  • telomere-related pulmonary fibrosis and/or bone marrow failure syndrome type 6
  • Sézary syndrome
  • pancreatic ductal adenocarcinoma
  • pancreatic epithelial cancer
  • ductal pancreatic cancer
regulated by
role in cell
  • apoptosis
  • proliferation
  • cell death
  • cell viability
  • phosphorylation in
  • activation in
  • binding in
  • recruitment in
  • formation
  • formation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • soluble fraction
  • chromatin fraction
  • Cytoplasm
  • nuclear foci
  • chromosome
  • nucleoplasm
  • nuclear bodies
  • PML nuclear bodies
  • synaptonemal complexes

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human RPA1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • DNA repair
  • base-excision repair
  • DNA replication
  • DNA-dependent DNA replication
  • DNA recombination
  • double-strand break repair via homologous recombination
  • nucleotide-excision repair
  • telomere maintenance via telomerase
  • telomere maintenance
  • mismatch repair
  • response to DNA damage stimulus
  • chromatin organization
  • meiotic cell cycle
  • protein localization to chromosome

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • chromosome, telomeric region
  • site of double-strand break
  • PML body
  • DNA replication factor A complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • metal ion binding
  • single-stranded telomeric DNA binding
  • damaged DNA binding
  • single-stranded DNA binding

Gene-Specific Assays for Results You Can Trust

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