TTF1 Gene Summary [Human]

This gene encodes a transcription termination factor that is localized to the nucleolus and plays a critical role in ribosomal gene transcription. The encoded protein mediates the termination of RNA polymerase I transcription by binding to Sal box terminator elements downstream of pre-rRNA coding regions. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. This gene shares the symbol/alias 'TFF1' with another gene, NK2 homeobox 1, also known as thyroid transcription factor 1, which plays a role in the regulation of thyroid-specific gene expression. [provided by RefSeq, Apr 2011]

Details

Type
Protein Coding
Official Symbol
TTF1
Official Name
transcription termination factor 1 [Source:HGNC Symbol;Acc:HGNC:12397]
Ensembl ID
ENSG00000125482
Bio databases IDs NCBI: 7270 Ensembl: ENSG00000125482
Aliases transcription termination factor 1
Synonyms AV245725, E130112J05, RGD1565673, transcription termination factor 1, transcription termination factor, RNA polymerase I, TTF-I
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human TTF1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • SANT
  • transcription regulator
  • Myb-like DNA-binding domain
  • chromatin binding
  • protein binding
  • DNA binding

Pathways

Biological processes and signaling networks where the TTF1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • epithelial cancer
  • small cell lung cancer
  • malignant pleural mesothelioma
  • lung adenocarcinoma formation
  • lung carcinoma process
  • plantar wart
  • lung adenocarcinoma
  • pleural mesothelioma
  • mesothelioma formation
regulated by
regulates
  • DNA endogenous promoter
  • rDNA
  • TG
  • RNA polymerase I
  • DNA promoter
  • SLC5A5
  • SFTPB
role in cell
  • cell death
  • apoptosis
  • proliferation
  • growth
  • migration
  • remodeling
  • processing in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • fibrillar center
  • nucleoplasm
  • nucleoli

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human TTF1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • termination of RNA polymerase I transcription
  • negative regulation of DNA replication
  • transcription termination, DNA-dependent

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • nucleolus
  • fibrillar center
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • protein binding
  • chromatin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.