RFTN1 Gene Summary [Human]

Enables double-stranded RNA binding activity. Involved in B cell receptor signaling pathway; membrane raft assembly; and positive regulation of growth rate. Acts upstream of or within dsRNA transport; response to exogenous dsRNA; and toll-like receptor 3 signaling pathway. Located in endosome; membrane raft; and plasma membrane. Part of protein-containing complex. [provided by Alliance of Genome Resources, Apr 2022]

Details

Type
Nonsense Mediated Decay
Official Symbol
RFTN1
Official Name
raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
Ensembl ID
ENSG00000131378
Bio databases IDs NCBI: 23180 Ensembl: ENSG00000131378
Aliases raftlin, lipid raft linker 1, raft-linking protein
Synonyms 2310015N21Rik, MIG2, PIB10, PIG9, RAFTLIN, raftlin lipid raft linker 1, raftlin, lipid raft linker 1, RGD1310777, RGD1563347
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human RFTN1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • double-stranded RNA binding
  • Raftlin

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • neoplasia
  • COVID-19
  • obesity
  • mantle cell lymphoma
  • polyglandular autoimmune syndrome type 1
  • experimental autoimmune encephalomyelitis
  • thoracic aortic aneurysm
regulated by
  • resiquimod
  • TNF
  • lipopolysaccharide
  • STAT5A/B
  • DNMT1
  • IL2
  • paclitaxel
  • U0126
  • allopurinol
  • poly rI:rC-RNA
regulates
role in cell
  • production in
  • differentiation
  • activation in
  • number
  • internalization by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • raft fractions
  • detergent resistant lipid raft fraction
  • Cytoplasm
  • endosomes
  • membrane rafts
  • plasma

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human RFTN1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • T cell antigen processing and presentation
  • membrane raft assembly
  • positive regulation of growth rate
  • response to exogenous dsRNA
  • toll-like receptor 3 signaling pathway
  • positive regulation of interleukin-17 production
  • protein transport into membrane raft
  • T cell receptor signaling pathway
  • dsRNA transport
  • B cell receptor signaling pathway

Cellular Component

Where in the cell the gene product is active
  • early endosome
  • extracellular vesicular exosome
  • endosome
  • cytoplasm
  • membrane raft
  • macromolecular complex
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • double-stranded RNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.