XPA Gene Summary [Human]

This gene encodes a zinc finger protein plays a central role in nucleotide excision repair (NER), a specialized type of DNA repair. NER is responsible for repair of UV radiation-induced photoproducts and DNA adducts induced by chemical carcinogens and chemotherapeutic drugs. The encoded protein interacts with DNA and several NER proteins, acting as a scaffold to assemble the NER incision complex at sites of DNA damage. Mutations in this gene cause Xeroderma pigmentosum complementation group A (XP-A), an autosomal recessive skin disorder featuring hypersensitivity to sunlight and increased risk for skin cancer. [provided by RefSeq, Aug 2017]

Details

Type
Nonsense Mediated Decay
Official Symbol
XPA
Official Name
XPA, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12814]
Ensembl ID
ENSG00000136936
Bio databases IDs NCBI: 7507 Ensembl: ENSG00000136936
Aliases XPA, DNA damage recognition and repair factor
Synonyms AI573865, xeroderma pigmentosum, complementation group A, Xeroderma pigmentosum group a correcting, XP1, XPAC, XPA, DNA damage recognition and repair factor
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human XPA often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • DBD_XPA-like
  • XPA protein N-terminal
  • DNA binding domain
  • nuclear localization sequence
  • protein domain specific binding
  • protein binding
  • sequence-specific DNA binding
  • damaged DNA binding
  • double-stranded DNA binding
  • replication protein A binding domain
  • protein homodimerization
  • XPA protein C-terminus
  • DNA repair protein

Pathways

Biological processes and signaling networks where the XPA gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • edema
  • epithelial cancer
  • epithelial neoplasia
  • cancer
  • adenoma formation
  • benign neoplasia
  • papillomatosis
  • neurological disorder
  • xeroderma pigmentosum complementation group A
regulated by
regulates
  • TNF
  • PTGS2
  • prostaglandin E2
  • cyclobutane pyrimidine dimer
  • DNA-cisplatin adduct
  • SupFG1 reporter gene
  • pyrimidine-pyrimidone (6-4) photoproducts
  • prostaglandin
  • PTGS1
  • plasmid
role in cell
  • cell viability
  • proliferation
  • function
  • cell death
  • apoptosis
  • number
  • survival
  • quantity
  • growth
  • cell cycle progression

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • cytoplasmic bridges
  • cytosol
  • nuclear foci
  • nucleoplasm
  • nucleoli
  • nuclear bodies

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human XPA gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • DNA repair
  • UV-damage excision repair
  • base-excision repair
  • UV protection
  • nucleotide-excision repair, DNA damage recognition
  • response to auditory stimulus
  • nucleotide-excision repair
  • protein localization to nucleus

Cellular Component

Where in the cell the gene product is active
  • nucleotide-excision repair factor 1 complex
  • nucleus
  • intercellular bridge
  • DNA replication factor A complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein domain specific binding
  • protein binding
  • protein homodimerization activity
  • metal ion binding
  • damaged DNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.