ERCC5 Gene Summary [Human]

This gene encodes a single-strand specific DNA endonuclease that makes the 3' incision in DNA excision repair following UV-induced damage. The protein may also function in other cellular processes, including RNA polymerase II transcription, and transcription-coupled DNA repair. Mutations in this gene cause xeroderma pigmentosum complementation group G (XP-G), which is also referred to as xeroderma pigmentosum VII (XP7), a skin disorder characterized by hypersensitivity to UV light and increased susceptibility for skin cancer development following UV exposure. Some patients also develop Cockayne syndrome, which is characterized by severe growth defects, cognitive disability, and cachexia. Read-through transcription exists between this gene and the neighboring upstream BIVM (basic, immunoglobulin-like variable motif containing) gene. [provided by RefSeq, Feb 2011]

Details

Type
Nonsense Mediated Decay
Official Symbol
ERCC5
Official Name
ERCC excision repair 5, endonuclease [Source:HGNC Symbol;Acc:HGNC:3437]
Ensembl ID
ENSG00000134899
Bio databases IDs NCBI: 2073 Ensembl: ENSG00000134899
Aliases ERCC excision repair 5, endonuclease, Cockayne syndrome
Synonyms COFS3, ERCC excision repair 5, endonuclease, ERCM2, Excision repair cross-complementing rodent repair deficiency,complementation group 5, UVDR, XPG, XPGC
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ERCC5 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • DNA excision repair protein (rad2)
  • catalytic domain
  • DNA secondary structure binding
  • Xeroderma pigmentosum G I-region
  • enzyme binding
  • XPG I-region
  • enzyme
  • XPG N-terminal domain
  • protein binding
  • Helix-hairpin-helix class 2 (Pol1 family) motifs
  • enzyme activator activity
  • endonuclease
  • H3TH_StructSpec-5'-nucleases
  • binding protein
  • damaged DNA binding
  • single-stranded DNA binding
  • double-stranded DNA binding
  • protein homodimerization
  • Xeroderma pigmentosum G N-region

Pathways

Biological processes and signaling networks where the ERCC5 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • cancer
  • xeroderma pigmentosum
  • cerebrooculofacioskeletal syndrome 3
  • ovarian cancer
  • xeroderma pigmentosum complementation group G
  • developmental delay
  • Cockayne syndrome
  • xeroderma pigmentosum group G/Cockayne syndrome
  • metastasis
  • liver cancer
regulated by
regulates
role in cell
  • apoptosis
  • expression in
  • survival
  • abnormal morphology
  • binding in
  • nucleotide excision repair in
  • damage in
  • reverse transcription in
  • senescence
  • reverse transcription

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear foci
  • nucleoplasm
  • nuclear matrix

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human ERCC5 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • base-excision repair, AP site formation
  • negative regulation of apoptotic process
  • transcription-coupled nucleotide-excision repair
  • double-strand break repair via homologous recombination
  • nucleotide-excision repair
  • response to UV-C
  • response to UV

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • nucleotide-excision repair complex
  • macromolecular complex
  • DNA replication factor A complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • protein homodimerization activity
  • metal ion binding
  • endonuclease activity
  • bubble DNA binding
  • double-stranded DNA binding
  • enzyme activator activity
  • endodeoxyribonuclease activity
  • damaged DNA binding
  • RNA polymerase II core binding
  • single-stranded DNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.